CX295528

Overview
NameCX295528
Unique NameCX295528
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 3
Query:  408 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLED 716
            RS    L+   +K+F+Y++L  AT NF   + +G+GG+G V+KG +          G+G ++A+KR  +   QG KE+LTEI  L +LHH NLV ++G+C E+
Sbjct:  599 RSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTL----------GSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEE 691          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 3
Query:  444 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            + F++ +L  AT NFR D  LGEGGFG VFKG +++            ++A+K+L++ G QG +E++ E+  L    HPNLVK++G+C E D R
Sbjct:   89 QTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEK---------LDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQR 173          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 3
Query:  414 EGEILQSSNIK--NFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLE 713
            E E L+  +++  +F+   +K AT NF P++ +GEGGFG V+KG + +          GM IAVK+L+ +  QG++E++TEI  +  L HPNLVK+ G C+E
Sbjct:  641 ENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLAD----------GMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIE 732          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 3
Query:  414 EGEILQSSNIK--NFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLE 713
            E E L+  +++  +F+   +K AT NF P++ +GEGGFG V+KG + +          GM IAVK+L+ +  QG++E++TEI  +  L HPNLVK+ G C+E
Sbjct:  643 ENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLAD----------GMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIE 734          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 3
Query:  393 LPQTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYC 707
            LP+ P      +   ++K +++++L +AT +F   S +G GG+G V+KG +         PG G+++AVKR  Q   QG KE+ TEI  L +LHH NLV ++GYC
Sbjct:  606 LPKPP------MNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHL---------PG-GLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYC 694          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 3
Query:  444 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDD 719
            + FS  ++K+AT +F    ++G GGFGSV+KG +D         G   L+AVKRL     QG KE+ TE+  L +L H +LV ++GYC ED+
Sbjct:  504 RRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQID---------GGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDN 586          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 34/96 (35.42%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  438 NIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            ++K FS+ +++TAT NF P ++LG+GGFG V+KG++            G ++AVKRL    + G  ++ TE+  +G   H NL+++ G+C+  + R
Sbjct:  284 HLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLP----------NGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEER 369          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 3
Query:  441 IKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLE 713
            I +FS   +K AT NF   + +GEGGFG V+KG + +          G +IAVK+L+    QG++E+L EI  +  LHHPNLVK+ G C+E
Sbjct:  609 IASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFD----------GTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVE 689          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  408 RSEGEILQSSNIKN-----FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            R EG+ L+   IK+       +  ++ AT +F  D+ LGEGGFG+V+KG +D           G  IAVKRL+ +  QG  E++ E++ + +L H NLV+++G+CL+ + R
Sbjct:  313 RHEGKDLEELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDY----------GEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEER 413          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 40/98 (40.82%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  426 LQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDD 719
            L S   + FS  ++K+AT +F    ++G GGFGSV+KG +D         G   L+AVKRL     QG KE+ TE+  L +L H +LV ++GYC +D+
Sbjct:  505 LPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRID---------GGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDN 593          
The following BLAST results are available for this feature:
BLAST of CX295528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
Y1684_ARATH3.159e-1639.81Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH2.674e-1541.49Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5344_ARATH1.327e-1441.18Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.327e-1441.18Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH5.043e-1439.05Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH3.269e-1342.39Putative receptor-like protein kinase At5g39000 OS... [more]
Y5457_ARATH3.269e-1335.42Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH3.269e-1343.96Probable LRR receptor-like serine/threonine-protei... [more]
CRK41_ARATH4.269e-1336.94Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
Y5389_ARATH5.576e-1340.82Probable receptor-like protein kinase At5g38990 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05073B08SK DroRLeaf1 Citrus clementina cDNA clone C05073B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295528 ID=CX295528; Name=CX295528; organism=Citrus clementina; type=EST; length=727bp
GGGGAAAAGAAACAAGTAATCAACAATAGCAAAGACCTTTTTTTTTTTTT
TTAACTTCTCATTTGGGTGCTTCTTAATCCAGAATTGAACCCAAATCCCA
CCCTAAAAGTGAAAAAGATCACACCCAAAATCTATTTGTGATCATTTGTT
GAGTTGGAGTTCTGGGTTCTGTTTGTTTCATTGAGGATAGAAAGAGAGAG
TACAAAACAAAACCATAAAGGAAAAAAATTTCTTTAAATAAGATCTGGGT
ATTTTGTTTTGTCTGGATGGGAGCTTGCTGTAGCAACAGGATTAAGGCTG
AGACTCCTTCTCATACTGATGTGAATTCAAAATATTCTAGCAGAGATGTA
AAGAGTTTAAGCAGTTCCAGTGGTAAGGCCTCTTCATTTTCCCTGCCTCA
AACACCACGGAGTGAGGGTGAGATCTTGCAGTCATCAAATATAAAGAATT
TCAGCTACAGCGACCTTAAGACAGCTACCAGAAACTTCCGCCCTGATAGT
GTTTTGGGAGAAGGCGGCTTTGGTTCTGTCTTCAAAGGATGGGTTGACGA
GCATTCACTTACTTCTACAAGGCCTGGTACTGGCATGTTAATTGCTGTGA
AGAGGCTTAACCAAGAAGGTTTCCAGGGTCACAAGGAATGGCTAACAGAA
ATTAACTATCTTGGGCAGTTGCATCATCCTAATCTTGTGAAAGTGGTTGG
TTACTGTTTAGAGGATGATCACCGGCT
back to top