CX295528

Overview
NameCX295528
Unique NameCX295528
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 3
Query:  450 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDH 722
            F YS++   T NF  + V+G+GGFG V+ G ++           G  +AVK L++E  QG+KE+  E++ L ++HH NL  +VGYC E +H
Sbjct:  564 FKYSEVVNITNNF--ERVIGKGGFGKVYHGVIN-----------GEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINH 641          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 3
Query:  408 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            + E E + + ++K F +S L+ AT +F  ++ LGEGGFG+V+KG + +          G  IAVKRL++   QG  E+  E   + +L H NLVK++GY +E   R
Sbjct:  319 KHENENISTDSMK-FDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSD----------GQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTER 413          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 3
Query:  444 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLE 713
            + FS S++K  T NF   +V+G GGFG V+KG +D           G  +A+K+ N    QG  E+ TEI  L +L H +LV ++GYC E
Sbjct:  507 RRFSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDG----------GTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDE 586          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 3
Query:  408 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLE 713
            ++E +  Q    K F++ +L   T NF   + +G GG+G V+KG         T P  G +IA+KR  Q   QG  E+ TEI  L ++HH N+VK++G+C +
Sbjct:  608 KNEMDAPQLMGTKAFTFEELSKCTNNFSDANDVGGGGYGQVYKG---------TLPN-GQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFD 699          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 35/104 (33.65%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  414 EGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            E + + ++    F +  ++ AT  F   + LG+GGFG V+KG             +G+ +AVKRL++   QG +E+  E+  + +L H NLV+++G+CLE D R
Sbjct:  327 ESDDITTAGSLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFP----------SGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDER 420          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 35/107 (32.71%), Postives = 59/107 (55.14%), Query Frame = 3
Query:  408 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQ-EGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            + E  +L   N+++F++ +L  AT  F   S+LG GGFG+V++G          + G G ++AVKRL    G  G+ ++ TE+  +    H NL++++GYC     R
Sbjct:  273 KQEEGLLGLGNLRSFTFRELHVATDGFSSKSILGAGGFGNVYRG----------KFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSER 369          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 3
Query:  450 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLED 716
            FS S+L+  T+NF    ++G GGFG+V+ G +D+          G  +A+KR N +  QG  E+ TEI  L +L H +LV ++GYC E+
Sbjct:  513 FSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDD----------GTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDEN 591          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 3
Query:  444 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDH 722
            K ++Y+++   T+ F  + VLG+GGFG V+ G+++         GT   +AVK L+    QG+KE+ TE+  L +++H NLV +VGYC E DH
Sbjct:  558 KRYTYAEVLAMTKKF--ERVLGKGGFGMVYHGYIN---------GTEE-VAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDH 638          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 3
Query:  444 KNFSYSDLKTATRNF-RPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDH 722
            K F+YS++   T+N  RP   LGEGGFG V+ G ++              +AVK L+Q   QG+KE+  E+  L ++HH NLV +VGYC E DH
Sbjct:  554 KRFTYSEVMEMTKNLQRP---LGEGGFGVVYHGDLNGSEQ----------VAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDH 634          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 3
Query:  414 EGEILQSSNIKN---FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYC 707
            +GE+L+   I +     Y DL  AT  F+ + ++G GGFG+VF+G +   S           IAVK++     QG +E++ EI  LG+L H NLV + G+C
Sbjct:  334 QGEVLEDWEINHPHRLRYKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQ--------IAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWC 426          
The following BLAST results are available for this feature:
BLAST of CX295528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SIRK_ARATH2.343e-1139.56Senescence-induced receptor-like serine/threonine-... [more]
CRK26_ARATH2.343e-1137.74Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
ANX2_ARATH2.343e-1140.00Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y5977_ARATH3.059e-1136.27Probable leucine-rich repeat receptor-like protein... [more]
CRK4_ARATH3.059e-1133.65Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
Y2239_ARATH5.219e-1132.71Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH5.219e-1139.33Probable receptor-like protein kinase At2g21480 OS... [more]
Y1756_ARATH5.219e-1139.78Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH6.816e-1142.55Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH6.816e-1136.63Lectin-domain containing receptor kinase A4.2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05073B08SK DroRLeaf1 Citrus clementina cDNA clone C05073B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295528 ID=CX295528; Name=CX295528; organism=Citrus clementina; type=EST; length=727bp
GGGGAAAAGAAACAAGTAATCAACAATAGCAAAGACCTTTTTTTTTTTTT
TTAACTTCTCATTTGGGTGCTTCTTAATCCAGAATTGAACCCAAATCCCA
CCCTAAAAGTGAAAAAGATCACACCCAAAATCTATTTGTGATCATTTGTT
GAGTTGGAGTTCTGGGTTCTGTTTGTTTCATTGAGGATAGAAAGAGAGAG
TACAAAACAAAACCATAAAGGAAAAAAATTTCTTTAAATAAGATCTGGGT
ATTTTGTTTTGTCTGGATGGGAGCTTGCTGTAGCAACAGGATTAAGGCTG
AGACTCCTTCTCATACTGATGTGAATTCAAAATATTCTAGCAGAGATGTA
AAGAGTTTAAGCAGTTCCAGTGGTAAGGCCTCTTCATTTTCCCTGCCTCA
AACACCACGGAGTGAGGGTGAGATCTTGCAGTCATCAAATATAAAGAATT
TCAGCTACAGCGACCTTAAGACAGCTACCAGAAACTTCCGCCCTGATAGT
GTTTTGGGAGAAGGCGGCTTTGGTTCTGTCTTCAAAGGATGGGTTGACGA
GCATTCACTTACTTCTACAAGGCCTGGTACTGGCATGTTAATTGCTGTGA
AGAGGCTTAACCAAGAAGGTTTCCAGGGTCACAAGGAATGGCTAACAGAA
ATTAACTATCTTGGGCAGTTGCATCATCCTAATCTTGTGAAAGTGGTTGG
TTACTGTTTAGAGGATGATCACCGGCT
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