CX295528

Overview
NameCX295528
Unique NameCX295528
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 3
Query:  420 EILQSSNIKNFSYSDLK---TATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDD 719
            ++  S+N ++    DL+   TAT NF  ++ LG+GGFGSV+KG +           +G  IAVKRL +   QG  E+  E+  L +L H NLVK++G+C E D
Sbjct:  320 DVFDSNNGQSMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILP----------SGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKD 412          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = 3
Query:  450 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            F +  ++ AT  F   +++G GGFG VF G ++           G  +A+KRL++   QG +E+  E+  + +LHH NLVK++G+CLE + +
Sbjct:  325 FDFKAIEDATNKFSESNIIGRGGFGEVFMGVLN-----------GTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEK 405          
BLAST of CX295528 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 34/96 (35.42%), Postives = 55/96 (57.29%), Query Frame = 3
Query:  438 NIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKVVGYCLEDDHR 725
            + +   +  ++ AT NF   + LG+GGFG V+KG +            G  +AVKRL++   QG +E+  E+  + +L H NLVK++GYCLE + +
Sbjct:  351 HFQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVN----------GTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEK 436          
The following BLAST results are available for this feature:
BLAST of CX295528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
CRK37_ARATH6.816e-1139.81Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK14_ARATH6.816e-1134.78Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK12_ARATH8.902e-1135.42Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05073B08SK DroRLeaf1 Citrus clementina cDNA clone C05073B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295528 ID=CX295528; Name=CX295528; organism=Citrus clementina; type=EST; length=727bp
GGGGAAAAGAAACAAGTAATCAACAATAGCAAAGACCTTTTTTTTTTTTT
TTAACTTCTCATTTGGGTGCTTCTTAATCCAGAATTGAACCCAAATCCCA
CCCTAAAAGTGAAAAAGATCACACCCAAAATCTATTTGTGATCATTTGTT
GAGTTGGAGTTCTGGGTTCTGTTTGTTTCATTGAGGATAGAAAGAGAGAG
TACAAAACAAAACCATAAAGGAAAAAAATTTCTTTAAATAAGATCTGGGT
ATTTTGTTTTGTCTGGATGGGAGCTTGCTGTAGCAACAGGATTAAGGCTG
AGACTCCTTCTCATACTGATGTGAATTCAAAATATTCTAGCAGAGATGTA
AAGAGTTTAAGCAGTTCCAGTGGTAAGGCCTCTTCATTTTCCCTGCCTCA
AACACCACGGAGTGAGGGTGAGATCTTGCAGTCATCAAATATAAAGAATT
TCAGCTACAGCGACCTTAAGACAGCTACCAGAAACTTCCGCCCTGATAGT
GTTTTGGGAGAAGGCGGCTTTGGTTCTGTCTTCAAAGGATGGGTTGACGA
GCATTCACTTACTTCTACAAGGCCTGGTACTGGCATGTTAATTGCTGTGA
AGAGGCTTAACCAAGAAGGTTTCCAGGGTCACAAGGAATGGCTAACAGAA
ATTAACTATCTTGGGCAGTTGCATCATCCTAATCTTGTGAAAGTGGTTGG
TTACTGTTTAGAGGATGATCACCGGCT
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