CX295529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RBH1B_ARATH (Ras-related protein RABH1B OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 53/163 (32.52%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVD-VKNRQVKAKQVTFH-RKKNLQYYEISAKSNYNFEKPFLYLARKLAG 591 +KLV +GD GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y A+I++DV +R ++ N W ++ ++ +VL GNK D V RQV ++ R+ N+ + E SAK+ +N + F +A L G Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPG 172
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/168 (32.14%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 109 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNL 603 + K++I+G+ G GK++ + R F+ + TIGV+ + + + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C +V L GNK+D NR+V + + F RK ++ + E SAK+ + F L K+ P L Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYCTRNDLVKMLVGNKIDKDNREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGL 175
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA + N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA + N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA + N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA + N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA + N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA + N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA + N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA + N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 165 The following BLAST results are available for this feature:
BLAST of CX295529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295529 ID=CX295529; Name=CX295529; organism=Citrus clementina; type=EST; length=703bpback to top |