CX295529

Overview
NameCX295529
Unique NameCX295529
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAS1_DROMA (Ras-like protein 1 OS=Drosophila mauritiana GN=Ras85D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 594
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAS1_DROER (Ras-like protein 1 OS=Drosophila erecta GN=Ras85D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 594
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAS1_DROAN (Ras-like protein 1 OS=Drosophila ananassae GN=Ras85D PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGD 594
            +KLV+VG GG GK+    + +   F  +Y+PTI  + +      +         DTAGQE++  +RD Y   G+  +++F V +  +++++ T+   + RV   E +P+VL GNK D+ +  V  +Q     K+  + Y E SAK+    +  F  L R++  D
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLASWNVNNEQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKD 166          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RALB_RAT (Ras-related protein Ral-B OS=Rattus norvegicus GN=Ralb PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 47/162 (29.01%), Postives = 87/162 (53.70%), Query Frame = 1
Query:  115 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC---ENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 585
            K+++VG GG GK+    + +  EF + YEPT   + +      +  +++    DTAGQE +  +RD Y+  G+  +++F +T   ++     +   + RV    + IP+++ GNK D+ + RQV  ++     ++  +QY E SAK+  N +K F  L R++
Sbjct:   16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREI 176          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAB36_HUMAN (Ras-related protein Rab-36 OS=Homo sapiens GN=RAB36 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 56/170 (32.94%), Postives = 79/170 (46.47%), Query Frame = 1
Query:   85 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE--NIPIVLCGNKVDVKN----RQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLA 576
            N  TV     K+V+VGD   GKT+ + R     F++ Y+ TIGV+     F           WDTAGQEKF  +   YY   Q  I  FD+T   T ++   W  D  R  E  +  I L G K D+ +     Q +A  V   R+   +Y+ +SAK+  N +  F  +A
Sbjct:  115 NTGTVGLKLSKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVA 284          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 1
Query:  115 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN---CGKI--RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 585
            K+ ++GD G GK++ V R +   F+    PTIG       F T    CG    +F  WDTAGQE+F  L   YY     A+I++D+T + ++  +  W ++L     ENI + + GNK D+ + R+V  K    + +       E SAK+  N E+ F  ++R++
Sbjct:    7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGAS-----FMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: YPT4_SCHPO (GTP-binding protein ypt4 OS=Schizosaccharomyces pombe GN=ypt4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 49/169 (28.99%), Postives = 94/169 (55.62%), Query Frame = 1
Query:   85 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG----KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKN-RQVKAKQVT-FHRKKNL-QYYEISAKSNYNFEKPFL 567
            ++++ DY   K+V+ G  GTGK+  ++R +  +++ +   T+G++          G    +I+   WDTAGQEKF  +   YY     A++++DVT + +++ + +W  D+  +    I +VL G+K D++N RQV  ++   F  +K++   +E S+ +  N E+ FL
Sbjct:    2 DKESYDY-LVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFL 169          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RASM_HUMAN (Ras-related protein M-Ras OS=Homo sapiens GN=MRAS PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 1
Query:  106 PSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKS-NYNFEKPFLYLAR 579
            P++KLV+VGDGG GK+    +     F   Y+PTI           N   I     DTAGQE+F  +R+ Y   G   +I++ VT + ++++V  +H+ + RV   E+ P++L  NKVD+ + R++  +Q      K N+ Y E SAK    N +K F  L R
Sbjct:   12 PTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAI-LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVR 173          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAS2_DROME (Ras-like protein 2 OS=Drosophila melanogaster GN=Ras64B PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 1
Query:  109 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKI-----RFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQ--YYEISAKSNYNFEKPFLYLAR 579
            ++KLV+VG GG GK+    + +   F   Y+PTI       D +T    I     +    DTAGQE+F  +R+ Y   G+  +++F +    ++  +P + R + RV   +  P+++ GNK D+K++Q  + +   +  +NL   Y E SAK   N ++ F  L R
Sbjct:    5 TYKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIE------DSYTKQCNIDDVPAKLDILDTAGQEEFSAMREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSLEEAQNTSRNLMIPYIECSAKLRVNVDQAFHELVR 164          
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAS1_NEUCR (Protein ras-1 OS=Neurospora crassa GN=ras-1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 46/162 (28.40%), Postives = 87/162 (53.70%), Query Frame = 1
Query:  112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 585
            +KLV+VG GG GK+    + + G F  +Y+PTI           N   +     DTAGQE++  +R+ Y   G+  +++F + +R +++ +  + + + RV   ++ P+++ GNK D++  +V ++Q       +   +Y E SAK+ +N E  F  L R++
Sbjct:    9 YKLVVVGGGGVGKSCLTIQLIQGHFLDEYDPTIEDSYRKQCTIDNEVAL-LDILDTAGQEEYSAMREQYMRTGEGFLLVFAINSRESFEEIRIYQQQILRVKDRDSFPMIIVGNKYDLRGERVVSEQEGQALAAEFGTKYIETSAKTQHNVENAFYDLVREI 169          
The following BLAST results are available for this feature:
BLAST of CX295529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS1_DROMA4.825e-1429.88Ras-like protein 1 OS=Drosophila mauritiana GN=Ras... [more]
RAS1_DROER4.825e-1429.88Ras-like protein 1 OS=Drosophila erecta GN=Ras85D ... [more]
RAS1_DROAN4.825e-1429.88Ras-like protein 1 OS=Drosophila ananassae GN=Ras8... [more]
RALB_RAT4.825e-1429.01Ras-related protein Ral-B OS=Rattus norvegicus GN=... [more]
RAB36_HUMAN4.825e-1432.94Ras-related protein Rab-36 OS=Homo sapiens GN=RAB3... [more]
RAB31_RAT4.825e-1432.12Ras-related protein Rab-31 OS=Rattus norvegicus GN... [more]
YPT4_SCHPO6.302e-1428.99GTP-binding protein ypt4 OS=Schizosaccharomyces po... [more]
RASM_HUMAN6.302e-1434.36Ras-related protein M-Ras OS=Homo sapiens GN=MRAS ... [more]
RAS2_DROME6.302e-1430.12Ras-like protein 2 OS=Drosophila melanogaster GN=R... [more]
RAS1_NEUCR6.302e-1428.40Protein ras-1 OS=Neurospora crassa GN=ras-1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC05073B09SK DroRLeaf1 Citrus clementina cDNA clone C05073B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295529 ID=CX295529; Name=CX295529; organism=Citrus clementina; type=EST; length=703bp
GAGGCCTCTCGCCGCCCCGACACTGAGCGCTCTCTCGCTTCAATTCAAAA
TCCAAACGCAACAAATCAACTCATGGCTCTGCCGAATCAGCAAACTGTTG
ATTATCCAAGCTTCAAACTTGTAATTGTCGGCGATGGTGGCACTGGGAAG
ACTACCTTTGTGAAGAGGCATCTTACTGGTGAATTCGAGAAGAAATATGA
ACCGACCATTGGTGTGGAAGTTCATCCATTGGACTTCTTTACCAACTGTG
GAAAAATACGATTCTATTGCTGGGACACTGCCGGACAAGAGAAGTTTGGT
GGTCTTAGAGATGGATACTACATCCATGGGCAATGTGCTATCATCATGTT
TGATGTTACTGCCCGCTTGACGTATAAGAATGTTCCGACGTGGCACCGTG
ATCTCTGCAGGGTGTGTGAAAACATCCCAATTGTTCTTTGCGGGAACAAG
GTCGATGTGAAGAACAGGCAGGTGAAAGCAAAGCAGGTTACTTTCCACAG
GAAGAAGAATTTGCAGTACTATGAGATCTCAGCCAAGAGCAATTACAACT
TTGAGAAGCCTTTTCTTTACCTTGCCAGAAAACTTGCTGGGGATCCTAAC
TTGCATTTTGTCGAGTCTCCTGCCCTTGCTCCCCCAGAGGTGCAAATCGA
TTTGGCTGCTCAGCAACACATGAAGCTGAACTTGCTGCTGCTGCTAGTCA
ACT
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