CX295529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 564 FKL+I+GD G GK++ + R F Y TIGV+ N K++ WDTAGQE+F + YY I+++DVT+ ++ NV W ++ + C+++ +L GNK D R+V + F + +Q +E SAK N N E+ F Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 564 FKL+I+GD G GK++ + R F Y TIGV+ N K++ WDTAGQE+F + YY I+++DVT+ ++ NV W ++ + C+++ +L GNK D R+V + F + +Q +E SAK N N E+ F Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 56/165 (33.94%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK------NLQYYEISAKSNYNFEKPFLYLARKL 585 FKL+++GD G GK+ + R + + + TIGV+ N I+ WDTAGQE+F + YY I+++DVT +LT++NV W +++ R CEN+ +L GNK D+ V K V F+ K + + E SAK + N E+ F+ +A ++ Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDL----VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEI 169
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 56/186 (30.11%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAA 660 FKL+++GD G GKT + R F + TIG++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + ++P P +D+++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI-------LRKTPVKEPNSENVDISS 188
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 56/186 (30.11%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAA 660 FKL+++GD G GKT + R F + TIG++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + ++P P +D+++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI-------LRKTPVKEPNSENVDISS 188
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19 Identity = 56/186 (30.11%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAA 660 FKL+++GD G GKT + R F + TIG++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+ +++V K K R+ ++++E SAK+N N EK FL LA + ++P P +D+++ Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI-------LRKTPVKEPNSENVDISS 188
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K NL + E SA + N E+ F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K NL + E SA + N E+ F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K NL + E SA + N E+ F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
BLAST of CX295529 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 112 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 564 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K NL + E SA + N E+ F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165 The following BLAST results are available for this feature:
BLAST of CX295529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295529 ID=CX295529; Name=CX295529; organism=Citrus clementina; type=EST; length=703bpback to top |