CX295540

Overview
NameCX295540
Unique NameCX295540
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.484e-34
Identity = 65/134 (48.51%), Postives = 95/134 (70.90%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYN-SEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI 409
            + N  R+ GT+GYMSPEYA+ G FS+KSDV+SFGV+VLEIISGK+N+ FYN  +   +L+ +AW+LW+ G  L+++D  +  S + +E  +CI++ LLCVQEDP DRP +  +++ML S    L  P+ P F +
Sbjct:  501 QANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMMLTSSTTTLHVPRAPGFCL 634          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.550e-34
Identity = 73/131 (55.73%), Postives = 94/131 (71.76%), Query Frame = 2
Query:   23 NRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNT--GFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI 409
            +R+ GTYGYM+PEYA+ G FSVK+DVFSFGV+V+EII+GKRN   G    E A  LL + W+ W+E   L ++D  L A S+ NEIL+CI++GLLCVQE    RPTM+ V +ML S +  L TP RPAFV+
Sbjct:  519 SRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAGSR-NEILRCIHIGLLCVQESAATRPTMATVSLMLNSYSFTLPTPLRPAFVL 648          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 5.942e-34
Identity = 68/128 (53.12%), Postives = 92/128 (71.88%), Query Frame = 2
Query:   23 NRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKL-HASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 403
            ++V GTYGYM+PEYA+ G FSVK+DVFSFGV+VLEII GK+N      + +L LL Y WK W+EG+ L+++D  L       +EI+KCI++GLLCVQE+   RPTM+ VV+ML + +  L  P +PAF
Sbjct:  506 SKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNANSFTLPRPSQPAF 633          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.942e-34
Identity = 68/133 (51.13%), Postives = 95/133 (71.43%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALS-LLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            N  RVVGTYGYM+PEYA+ G FS+KSDV+SFGV+V EIISG +N+  Y  + ++S L+ Y W+LW  G  LD++D     + + ++I +CI++ LLCVQED +DRP MS +V ML + ++ LA PK+P F  R
Sbjct:  666 NTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQMLTTSSIVLAVPKQPGFFFR 798          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.761e-34
Identity = 67/129 (51.94%), Postives = 97/129 (75.19%), Query Frame = 2
Query:   23 NRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKL--HASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 403
            NR+VGT+GYM+PEY + G FS K+DV+SFGV+VLEIISGK+N+GF + +    L+ +AW+ W+EG AL+++D+ L   +S   N I++CIN+GLLCVQE   +RP+M+ VV+ML    + L+ P +PAF
Sbjct:  505 NRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDGHTIALSEPSKPAF 633          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.949e-33
Identity = 65/137 (47.45%), Postives = 97/137 (70.80%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQ---ALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            +GN NR+ GTY YMSPEYA+ G +S+KSD++SFGV+VLEIISGK+N+G Y  ++   A +L+ YA +LW+    L+++D     + + NE+ +CI++ LLCVQE+P DRP +S +++ML S  + L  P+ P F  R
Sbjct:  506 QGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTSNTITLPVPRLPGFFPR 642          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 3.852e-33
Identity = 67/133 (50.38%), Postives = 95/133 (71.43%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALS-LLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            N  RVVGTYGYM+PEYA+ G FS+KSDV+SFGV+VLEI+SG +N+     + ++S L+ Y W+LW  G   +++D     + + +EI +CI++ LLCVQED NDRPTMS +V ML + ++ LA P+ P F +R
Sbjct:  502 NTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSSIALAVPRPPGFFLR 634          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 3.852e-33
Identity = 67/130 (51.54%), Postives = 93/130 (71.54%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQAL-SLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            RVVGTYGYMSPEYA+ G FS+KSDV+SFGV+VLEIISG +N+  Y  ++++ +L+ Y W+LW  G   +++D     + + +EI +CI++ LLCVQED  DRPTMS +V ML +  + LA P+ P F  R
Sbjct:  487 RVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAEPRPPGFFFR 616          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.030e-33
Identity = 60/132 (45.45%), Postives = 95/132 (71.97%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSE-QALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI 409
            N  R+ GT+GYM PEY + G FS+KSDV+SFGV++LEII GK+N  FY ++ +A +L+ Y W+LW  G  L+++D  +  + +  E+++CI++ LLCVQEDP DRP +S +++ML + ++ L+ P+ P F +
Sbjct:  525 NTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTEEVIRCIHIALLCVQEDPKDRPNLSTIMMMLTNSSLILSVPQPPGFFV 656          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.496e-32
Identity = 70/131 (53.44%), Postives = 94/131 (71.76%), Query Frame = 2
Query:   23 NRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGK-RNTGFYN-SEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI 409
            +++ GTYGYM+PEYA+ G FSVK+DVFSFGV+V+EII+GK  N G  N  E+A +LL + W+ W+E   L ++D  L   S+ +EIL+CI++GLLCVQE P  RPTM  V +ML S +  L TP RPAF +
Sbjct:  523 SKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTGSR-SEILRCIHIGLLCVQESPASRPTMDSVALMLNSYSYTLPTPSRPAFAL 652          
The following BLAST results are available for this feature:
BLAST of CX295540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
CRK35_ARATH3.484e-3448.51Putative cysteine-rich receptor-like protein kinas... [more]
CRK29_ARATH4.550e-3455.73Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK41_ARATH5.942e-3453.13Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK23_ARATH5.942e-3451.13Putative cysteine-rich receptor-like protein kinas... [more]
CRK26_ARATH7.761e-3451.94Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK11_ARATH2.949e-3347.45Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK20_ARATH3.852e-3350.38Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH3.852e-3351.54Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK12_ARATH5.030e-3345.45Putative cysteine-rich receptor-like protein kinas... [more]
CRK28_ARATH2.496e-3253.44Cysteine-rich receptor-like protein kinase 28 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05073C09SK DroRLeaf1 Citrus clementina cDNA clone C05073C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295540 ID=CX295540; Name=CX295540; organism=Citrus clementina; type=EST; length=638bp
GATTCGGCCGAGGGGGAACCCAAATCGAGTGGTTGGAACTTATGGCTATA
TGTCTCCAGAGTATGCATTAGATGGATTTTTCTCAGTCAAGTCCGATGTT
TTCAGCTTTGGCGTAGTTGTGCTTGAGATTATCAGTGGAAAAAGAAACAC
TGGATTTTATAATTCAGAACAAGCTTTGAGCCTTCTAGGTTACGCGTGGA
AATTGTGGCAAGAAGGCAAGGCATTAGATATGATGGATCAGAAACTACAT
GCCAGCTCCAAACCAAATGAAATCTTAAAGTGCATAAATGTTGGGCTCTT
ATGTGTGCAGGAAGATCCAAACGATCGTCCCACGATGTCTGATGTTGTTA
TCATGCTTGGCAGTGAAGCTATGAACCTTGCAACTCCTAAACGACCAGCC
TTTGTCATCAGGAGAGGATCTTCTAGCTCGGCATCTTCTTCTAATAAACC
AGAATCAAACAACGAACTAACAAATACTTTAGAATGTAGATAATCAGGGA
GAATTCTTAATAAGTTTGTCCTCCTTTTGTTAATCCTGCACAATCAGCTT
ATTGTACATCATCAAATGTTGGTTCTTATATCAGAAGTTGCCTGCTATGT
ATCCTTTATTATTAGGTACTTCTCTTCAGGAAAAAAAA
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