CX295540

Overview
NameCX295540
Unique NameCX295540
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.496e-32
Identity = 63/134 (47.01%), Postives = 95/134 (70.90%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQ---ALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 403
            RGN N +  T+ YMSPEYA+ G FS+KSDV+SFG+++LEIISGK+N+  Y +++   A +L+ YAW+LW+ G  L ++D  +  + + NE+ +CI++ LLCVQE+P DRP +S +V ML S  +++  P  P F
Sbjct:  509 RGNTNWIAETFVYMSPEYAVHGKFSMKSDVYSFGILILEIISGKKNSSLYQNDETTTAGNLVTYAWRLWRNGSQLKLLDSSIGRNYQSNEVTRCIHIALLCVQENPEDRPKLSTIVSMLTSNTISVPAPGIPGF 642          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.264e-32
Identity = 65/135 (48.15%), Postives = 92/135 (68.15%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQAL-SLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRG 418
            N  RVVGT+GYMSPEY   G FS+KSDV+SFGV++LEIISGK+N+ FY  +  + +L+ Y WKLW+     +++D  ++      E+++ I++GLLCVQE+P DRPTMS +  ML + ++ L  P  P F  R G
Sbjct:  497 NTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMSTIHQMLTNSSITLPVPLPPGFFFRNG 631          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.264e-32
Identity = 64/135 (47.41%), Postives = 94/135 (69.63%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQAL-SLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRG 418
            N  RVVGT+GYMSPEY   G FS+KSDV+SFGV++LEIISGK+N+ FY  +  + +L+ Y WKLW+     +++D  +    K +E+++ +++GLLCVQE+P DRPTMS +  +L + ++ L  P+ P F  R G
Sbjct:  517 NTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGFFFRNG 651          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.760e-31
Identity = 64/130 (49.23%), Postives = 91/130 (70.00%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALS-LLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            RVVGT GYM PEY  +G FS KSDV+SFGV++LEII GK+N+    ++ ++S L+ Y W+LW     L+++D  +  +   NE+++CI++GLLCVQE+P DRPTMS V  ML + ++ L  P+ P FV R
Sbjct:  473 RVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSISNLVTYVWRLWNNEPLLELVDAPMGENYDRNEVIRCIHIGLLCVQENPADRPTMSTVFHMLTNTSITLHVPQPPGFVFR 602          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.605e-31
Identity = 63/146 (43.15%), Postives = 98/146 (67.12%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQAL-SLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRGXXXXXXXXNKPESN 460
            RVVGT+GYM PEY   G FS KSDV+SFGV++LEI+SG++N+ FY  + ++ +L+ Y W+LW    +L+++D  +  S + +E+ +CI++GLLCVQE+P +RP +S +  ML + ++ L  P+ P F  R          N+PES+
Sbjct:  510 RVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQMDGSVCNLVTYVWRLWNTDSSLELVDPAISGSYEKDEVTRCIHIGLLCVQENPVNRPALSTIFQMLTNSSITLNVPQPPGFFFR----------NRPESD 645          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.149e-31
Identity = 61/133 (45.86%), Postives = 88/133 (66.17%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYN-SEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            N  RVVGT+GYM PEY   G FS KSDV+SFGV++LEI+ GK+N+ FY   +   +L+ + W+LW     LD++D  +  S   +++++CI++GLLCVQE P DRP MS +  ML + ++ L  P+ P F  R
Sbjct:  487 NTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHVWRLWNNDSPLDLIDPAIEESCDNDKVIRCIHIGLLCVQETPVDRPEMSTIFQMLTNSSITLPVPRPPGFFFR 619          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.370e-30
Identity = 61/133 (45.86%), Postives = 94/133 (70.68%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALS-LLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            N  RVVGT+GYM PEY  +G FS KSDV+SFGV++LEII GK+N+ F+  + ++S L+ + W+L   G  L+++D  +  +   +E+++CI++GLLCVQE+P+DRP+MS +  ML + ++ L  P+ P F  R
Sbjct:  521 NTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRMLTNVSITLPVPQPPGFFFR 653          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.789e-30
Identity = 62/130 (47.69%), Postives = 92/130 (70.77%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQAL-SLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            RVVGT+GYM PEY  +G FS+KSDV+SFGV++LEII GK+++ F+  + ++ +L+ Y W+LW     L+++D  +  S   +E+++CI++ LLCVQE+P DRPTMS V  ML +  + L  P+ P FV R
Sbjct:  496 RVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQMLTNTFLTLPVPQLPGFVFR 625          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.205e-30
Identity = 59/130 (45.38%), Postives = 88/130 (67.69%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQAL-SLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR 412
            RVVGT+GYM PEY   G FS KSDV+SFGV++LEI+ GK+N+ F+  + +  +L+ + W+LW     LD++D  +  S   +E+++CI++G+LCVQE P DRP MS +  ML + ++ L  P+ P F  R
Sbjct:  500 RVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQMDDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQETPADRPEMSTIFQMLTNSSITLPVPRPPGFFFR 629          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.755e-29
Identity = 66/131 (50.38%), Postives = 88/131 (67.18%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG--SEAMNLATPKRPAFVIR 412
            RVVGTYGYM+PEYA+ G FSVK+DV+SFGV+VLEII+GKRN+G    E    L  +AW+ W EG +++++D  L  +    E ++C+ + L CVQE+P  RPTM  VV ML   SE+  L  P +P F  R
Sbjct:  494 RVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGLGE-GTDLPTFAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSMLSSDSESRQLPKPSQPGFFRR 623          
The following BLAST results are available for this feature:
BLAST of CX295540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
CRK22_ARATH2.496e-3247.01Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK18_ARATH7.264e-3248.15Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK17_ARATH7.264e-3247.41Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK24_ARATH2.760e-3149.23Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK30_ARATH3.605e-3143.15Putative cysteine-rich receptor-like protein kinas... [more]
CRK32_ARATH6.149e-3145.86Putative cysteine-rich receptor-like protein kinas... [more]
CRK21_ARATH1.370e-3045.86Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK16_ARATH1.789e-3047.69Putative cysteine-rich receptor-like protein kinas... [more]
CRK31_ARATH5.205e-3045.38Putative cysteine-rich receptor-like protein kinas... [more]
CRK27_ARATH5.755e-2950.38Cysteine-rich receptor-like protein kinase 27 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05073C09SK DroRLeaf1 Citrus clementina cDNA clone C05073C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295540 ID=CX295540; Name=CX295540; organism=Citrus clementina; type=EST; length=638bp
GATTCGGCCGAGGGGGAACCCAAATCGAGTGGTTGGAACTTATGGCTATA
TGTCTCCAGAGTATGCATTAGATGGATTTTTCTCAGTCAAGTCCGATGTT
TTCAGCTTTGGCGTAGTTGTGCTTGAGATTATCAGTGGAAAAAGAAACAC
TGGATTTTATAATTCAGAACAAGCTTTGAGCCTTCTAGGTTACGCGTGGA
AATTGTGGCAAGAAGGCAAGGCATTAGATATGATGGATCAGAAACTACAT
GCCAGCTCCAAACCAAATGAAATCTTAAAGTGCATAAATGTTGGGCTCTT
ATGTGTGCAGGAAGATCCAAACGATCGTCCCACGATGTCTGATGTTGTTA
TCATGCTTGGCAGTGAAGCTATGAACCTTGCAACTCCTAAACGACCAGCC
TTTGTCATCAGGAGAGGATCTTCTAGCTCGGCATCTTCTTCTAATAAACC
AGAATCAAACAACGAACTAACAAATACTTTAGAATGTAGATAATCAGGGA
GAATTCTTAATAAGTTTGTCCTCCTTTTGTTAATCCTGCACAATCAGCTT
ATTGTACATCATCAAATGTTGGTTCTTATATCAGAAGTTGCCTGCTATGT
ATCCTTTATTATTAGGTACTTCTCTTCAGGAAAAAAAA
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