CX295540

Overview
NameCX295540
Unique NameCX295540
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.817e-29
Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 403
            R    R+ GT GYM+PEY   G  S KSDV+SFGV++LE+ISG+RN    NS +   L  +AWK W EGK   ++D  L    + NEI+K I +GLLCVQE+P  RPTMS V+I LGSE   +  PK PAF
Sbjct:  509 RAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERN----NSFEGEGLAAFAWKRWVEGKPEIIIDPFLIEKPR-NEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGSETNIIPLPKAPAF 634          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.856e-28
Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 403
            R    R+ GT GYM+PEY   G  S KSDV+SFGV++LE+ISG+RN    NS +   L  +AWK W EGK   ++D  L  + + NEI+K I +GLLCVQE+   RPTMS V+I LGSE + +  PK PAF
Sbjct:  504 RAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERN----NSFEGEGLAAFAWKRWVEGKPEIIIDPFLIENPR-NEIIKLIQIGLLCVQENSTKRPTMSSVIIWLGSETIIIPLPKAPAF 629          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.418e-27
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 2
Query:   35 GTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRP 397
            GT GYM+PEY   G FS+KSDV+S+GV+VLEII GKRNT F +  Q  + + Y W+LW+ G  L+++D  +  + K  E+++CI++ LLCVQE+P DRP  S ++ ML S ++ L  PK P
Sbjct:  522 GTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFSSPVQ--NFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSLILPVPKPP 640          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.418e-27
Identity = 63/131 (48.09%), Postives = 90/131 (68.70%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 403
            R    +VVGT+GYM+PEY  +  FSVK+DV+SFGVV+LE+I+G+ N  ++   +AL L  YAWK W  G+A  ++D  L + S+ NEI++ I++GLLCVQE+ + RPTMS V+  LGSE + +  P    F
Sbjct:  495 RAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGRSNKNYF---EALGLPAYAWKCWVAGEAASIIDHVL-SRSRSNEIMRFIHIGLLCVQENVSKRPTMSLVIQWLGSETIAIPLPTVAGF 621          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.200e-26
Identity = 54/130 (41.54%), Postives = 86/130 (66.15%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQAL-SLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 403
            N  ++ GT GYM PEY   G FS +SDV+SFGV+VLEII G+ N   + S+  + +L+ YAW+LW+    L+++D  +  + +  E+ +CI++ LLCVQ +P DRP++S + +ML + +  L  P++P F
Sbjct:  494 NTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQHNPTDRPSLSTINMMLINNSYVLPDPQQPGF 623          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.492e-26
Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE-AMNLATPKRPAFV 406
            RG  +RVVGTYGYM+PEY   G FS KSDV+SFGV++LE+ISG++N  F    +   L  +AWK W EG+   ++D  L+ + + NEI+K I +GLLCVQE+   RPTM+ V+  L  +    +  P   AFV
Sbjct:  496 RGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNF----ETEGLPAFAWKRWIEGELESIIDPYLNENPR-NEIIKLIQIGLLCVQENAAKRPTMNSVITWLARDGTFTIPKPTEAAFV 623          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24
Identity = 61/139 (43.88%), Postives = 88/139 (63.31%), Query Frame = 2
Query:   11 RGNPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGF--YNSEQALSLLGYAWKLWQEGKALDMMDQKLHASS--KPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA-MNLATPKRPAFVIR 412
            RG  +RVVGTYGYM+PEYA  G FS KSDV+SFGV++LE+ISGK N        E+   L  + WK W EG+  +++D     S+    NE++K I++GLLCVQED + RP+++ ++  L   A + +  P   A++ R
Sbjct:  501 RGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDPLAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSILFWLERHATITMPVPTPVAYLTR 639          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 8.050e-23
Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIML 358
            R+ GT GYM+PEYA+ G+ + K+DV+SFGVV LEI+SGK NT +   E+ + LL +A+ L ++G  L+++D  L  S    E ++ +N+ LLC    P  RP MS VV ML
Sbjct:  828 RIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSML 938          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.051e-22
Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 2
Query:   26 RVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIML 358
            R+ GT GYM+PEYA+ G+ + K+DV+SFGVV LEI+SGK NT +   E+ + LL +A+ L ++G  L+++D  L  S    E ++ +N+ LLC    P  RP MS VV ML
Sbjct:  830 RIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSML 940          
BLAST of CX295540 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.373e-22
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = 2
Query:   17 NPNRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEIISGKRNTGFYNSEQALSLLGYAWKLWQEGKALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFV 406
            +P+ + GT GYM+PEY   G  S K D +SFGV+VLEI SG RN  F +     +L+   WK +   K  +M+D+ +   +   E+ + + +GLLC QE P  RPTMS V+ M+ S  + L TP +P F+
Sbjct:  492 SPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSSTDIVLPTPTKPPFL 621          
The following BLAST results are available for this feature:
BLAST of CX295540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
CRK39_ARATH9.817e-2951.91Putative cysteine-rich receptor-like protein kinas... [more]
CRK40_ARATH2.856e-2851.15Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK13_ARATH1.418e-2748.76Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
CRK38_ARATH2.418e-2748.09Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK14_ARATH1.200e-2641.54Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
CRK36_ARATH3.492e-2647.37Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK37_ARATH2.502e-2443.88Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y5344_ARATH8.050e-2345.95Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.051e-2245.95Probable LRR receptor-like serine/threonine-protei... [more]
CRK43_ARATH1.373e-2240.77Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05073C09SK DroRLeaf1 Citrus clementina cDNA clone C05073C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295540 ID=CX295540; Name=CX295540; organism=Citrus clementina; type=EST; length=638bp
GATTCGGCCGAGGGGGAACCCAAATCGAGTGGTTGGAACTTATGGCTATA
TGTCTCCAGAGTATGCATTAGATGGATTTTTCTCAGTCAAGTCCGATGTT
TTCAGCTTTGGCGTAGTTGTGCTTGAGATTATCAGTGGAAAAAGAAACAC
TGGATTTTATAATTCAGAACAAGCTTTGAGCCTTCTAGGTTACGCGTGGA
AATTGTGGCAAGAAGGCAAGGCATTAGATATGATGGATCAGAAACTACAT
GCCAGCTCCAAACCAAATGAAATCTTAAAGTGCATAAATGTTGGGCTCTT
ATGTGTGCAGGAAGATCCAAACGATCGTCCCACGATGTCTGATGTTGTTA
TCATGCTTGGCAGTGAAGCTATGAACCTTGCAACTCCTAAACGACCAGCC
TTTGTCATCAGGAGAGGATCTTCTAGCTCGGCATCTTCTTCTAATAAACC
AGAATCAAACAACGAACTAACAAATACTTTAGAATGTAGATAATCAGGGA
GAATTCTTAATAAGTTTGTCCTCCTTTTGTTAATCCTGCACAATCAGCTT
ATTGTACATCATCAAATGTTGGTTCTTATATCAGAAGTTGCCTGCTATGT
ATCCTTTATTATTAGGTACTTCTCTTCAGGAAAAAAAA
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