CX295545

Overview
NameCX295545
Unique NameCX295545
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   20 LQNLSVAANQLSGPIPPEISAXXXXXXXXXXXXVF-NGSFPPQLSQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAANCGLSGEIP 502
            L+ LS+ +  +SGP+P +I               F +G+ P ++S L +L+ L L NN   G +P  +  L NL+ L+LGGN    ++ P   +   L  +++  N  G KIP +I  L KLQ L +   N +TG +P  + +L SL     A   LSG +P
Sbjct:  109 LKTLSLVSLGISGPLPSQIIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVP-DLRGLSNLQELNLGGNKLGPEVVP--SLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLS-SNKFTGSIPRFLLSLPSLQNLSLAQNLLSGSLP 266          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.368e-12
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 2
Query:  125 NGSFPPQLSQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAAN 478
            +G   P+L  L +LQ L+LY+NN+TG +P  +  L NL  L L  N FSG IP   G    L +L ++ N L G IP  + N+T LQ L +   N+   G  P+ G+ S       AN
Sbjct:   82 SGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLS--NNRLSGSVPDNGSFSLFTPISFAN 197          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: TMM_ARATH (Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.787e-12
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2
Query:  122 FNGSFPPQLSQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAANCGLSGEIPTDIGRLQNLDTL 538
            F G  P +L  L +L+VLDL+ N++ G +PL+  +   LR L L GN  +G IP    +   L  L ++ N L G +P  + +   L ++ +   N  TG +P  I  L+ LV  D +   LSG  P+ +  L +L  L
Sbjct:  171 FLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPG--FVLPALSVLDLNQNLLTGPVPPTLTSCGSLIKIDLS-RNRVTGPIPESINRLNQLVLLDLSYNRLSGPFPSSLQGLNSLQAL 306          

HSP 2 Score: 68.1662 bits (165), Expect = 3.370e-11
Identity = 47/130 (36.15%), Postives = 65/130 (50.00%), Query Frame = 2
Query:  158 ASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAANCGLSGEIPTDIGRLQNLDTLFFS 547
            +SLQ L L  N   G +P  +  L NL+ L L  N  +G IP  +  +  L  L +SGN L G IPG +  L  L  L +   N  TG +PP + +  SL++ D +   ++G IP  I RL  L  L  S
Sbjct:  159 SSLQTLVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPGFV--LPALSVLDLN-QNLLTGPVPPTLTSCGSLIKIDLSRNRVTGPIPESINRLNQLVLLDLS 285          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 2
Query:  125 NGSFPPQLSQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAAN 478
            +G   PQL QL +LQ L+LY+NN+TG +P  +  L NL  L L  N F+G IP   G    L +L ++ N L G IP  + N+  LQ L +   N+   G  P+ G+ S       AN
Sbjct:   85 SGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLS--NNRLSGSVPDNGSFSLFTPISFAN 200          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.791e-12
Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 2
Query:  128 GSFPPQLSQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLS 451
            G  PP + +L  L++L L+NN + G +P A+     L  +HL  N+F+G IP E G    L+ L +S N L G IP  +G L KL    +   N++  G  P  G LS
Sbjct:   88 GPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGLQKLDMSSNTLSGPIPASLGQLKKLSNFNVS--NNFLVGQIPSDGVLS 193          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  125 NGSFPPQL-SQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAANCGLSGEIPTDIGRLQN 526
            +G  P  +   L  L+ L L  N ++G LP  ++   NLRHL+L GN FSG+IP        L  L ++ N   G+I     NLTKL+ L++   N+   G  P++     LV+F+ +N  L+G IP ++ R ++
Sbjct:   85 SGDIPEGIFGNLTQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFL--ENNQLSGSIPDLD--LPLVQFNVSNNSLNGSIPKNLQRFES 215          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11
Identity = 53/186 (28.49%), Postives = 87/186 (46.77%), Query Frame = 2
Query:    8 HLRFLQNLSVAANQLSGPIPPEISAXXXXXXXXXXXXVFNGSFPPQLSQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIP-----------PEYG-IWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAANCGLSGEIPTDIGRLQNL 529
            H   L+ L VA  +L+G +P  +S+               G+ P  +    +L  LDL NN+ TG++P ++T+L +L   ++  N  S   P            +Y  I+ F   + +  N L G I  E GNL KL  ++   +N+ +G +P  +  ++SL   D +N  LSG IP  + +L  L
Sbjct:  413 HFEKLKVLVVANCRLTGSMPRWLSSSNELQLLDLSWNRLTGAIPSWIGDFKALFYLDLSNNSFTGEIPKSLTKLESLTSRNISVNEPSPDFPFFMKRNESARALQYNQIFGFPPTIELGHNNLSGPIWEEFGNLKKL-HVFDLKWNALSGSIPSSLSGMTSLEALDLSNNRLSGSIPVSLQQLSFL 597          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.581e-11
Identity = 48/148 (32.43%), Postives = 69/148 (46.62%), Query Frame = 2
Query:  125 NGSFPPQLSQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIWEFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAANCG-LSGEIPTDIGRLQNLDTLFFSERSAGH 565
            +G     + +L  L  L L NN +TG +P  + QL  L  L L GN FSG+IP   G    L YL +S N L G++P  +  L+ L  L + + N    G  P I      +  +A  CG  S E+ +D   ++N   L   + S  H
Sbjct:   92 SGILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFNN--LSGPTPNISAKDYRIVGNAFLCGPASQELCSDATPVRNATGLSEKDNSKHH 237          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.370e-11
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  173 LDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIW-EFLEYLAVSGNELGGKIPGEIGNLTKLQQLYIGYYNSYTGGLPPEIGNLSSLVRFDAANCGLSGEIPTDIGR 517
            L L +  + G++P ++   R+L+ L L GN  SG IP +   W  +L  L +SGN+LGG IP +I     L  L +   N  +G +P ++  L  L R   A   LSG IP+++ R
Sbjct:   77 LQLQSMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSD-NKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPSELAR 191          
BLAST of CX295545 vs. ExPASy Swiss-Prot
Match: PGIP2_PHAVU (Polygalacturonase inhibitor 2 OS=Phaseolus vulgaris GN=PGIP2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.370e-11
Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 2
Query:    5 AHLRFLQNLSVAA-NQLSGPIPPEISAXXXXXXXXXXXXVFNGSFPPQLSQLASLQVLDLYNNNMTGDLPLAVTQLRNLRHLHLGGNFFSGQIPPEYGIW-EFLEYLAVSGNELGGKIPGEIGNL 373
            A+L +L  L +   N L GPIPP I+               +G+ P  LSQ+ +L  LD   N ++G LP +++ L NL  +   GN  SG IP  YG + +    + +S N L GKIP    NL
Sbjct:  102 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL 226          
The following BLAST results are available for this feature:
BLAST of CX295545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
Y1143_ARATH1.048e-1232.72Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH1.368e-1238.14Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
TMM_ARATH1.787e-1233.09Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN... [more]
SERK2_ARATH3.048e-1238.14Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
FEI1_ARATH6.791e-1237.04LRR receptor-like serine/threonine-protein kinase ... [more]
Y1848_ARATH8.869e-1234.07Probable inactive receptor kinase At1g48480 OS=Ara... [more]
PSKR1_ARATH1.513e-1128.49Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y5457_ARATH2.581e-1132.43Probable LRR receptor-like serine/threonine-protei... [more]
Y1719_ARATH3.370e-1135.34Probable inactive receptor kinase At1g27190 OS=Ara... [more]
PGIP2_PHAVU3.370e-1135.20Polygalacturonase inhibitor 2 OS=Phaseolus vulgari... [more]

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Properties
Property NameValue
Genbank descriptionC05073D02SK DroRLeaf1 Citrus clementina cDNA clone C05073D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295545 ID=CX295545; Name=CX295545; organism=Citrus clementina; type=EST; length=579bp
AGGGGCCCACCTCCGCTTCCTCCAGAACCTCTCCGTCGCCGCCAACCAGC
TCTCCGGCCCCATTCCCCCGGAGATCTCCGCCCTCTCCTCTCTCCGCCTC
CTGAACCTCTCCAACAATGTCTTCAACGGCTCATTCCCACCCCAGCTGTC
ACAGCTTGCTAGCTTACAAGTACTCGACTTGTATAACAACAACATGACCG
GTGACTTGCCGCTTGCTGTTACCCAGCTGAGAAACTTGCGCCACTTGCAT
CTCGGTGGCAACTTTTTCTCCGGTCAGATCCCGCCGGAGTACGGCATCTG
GGAGTTTCTGGAATACTTGGCGGTTTCCGGTAACGAACTCGGAGGCAAAA
TCCCCGGCGAAATCGGTAACCTAACGAAGCTGCAGCAGCTGTACATTGGT
TATTACAACAGCTACACCGGCGGTTTGCCTCCGGAAATCGGAAACTTATC
GTCGTTGGTCCGATTCGACGCTGCCAACTGTGGGCTTTCTGGTGAAATAC
CGACCGATATAGGGAGGTTGCAAAACTTGGACACTCTGTTCTTCAGTGAA
CGCTCTGCTGGCCATTACACAACTGGGTA
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