CX295551

Overview
NameCX295551
Unique NameCX295551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length636
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.248e-49
Identity = 92/193 (47.67%), Postives = 125/193 (64.77%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPA-WREDPVINAAFEKFRGKLMELEGIID 576
            YP+ANDGL LW AI+ WV  YV  YYP+ +L+++D ELQ+W++E   VGH D +   WWP L T  DL+ I+TT++W+ S  HAA+NFGQY YGGY PNRP   R  I   D SD ++  F+  PE    ++ PS  Q +K MA++D LSTHSPDEEY+G+  +P+ W  D  I  AF  F  ++  +E  I+
Sbjct:  688 YPYANDGLLLWSAIQTWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLI--PDESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIE 878          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.115e-48
Identity = 98/208 (47.12%), Postives = 118/208 (56.73%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGK---EIEPAWREDPVINAAFEKFRGKLMELEGIIDAGCRSQLR*NELG 615
            YP+ANDGL LW AI+ WV  YV  YYPD   V+ D ELQ W+ E   VGHGD +H PWWP L TP DL  I+TT+VW+ S  HAA+NFGQY  GGY PNRP   R  +   +    ++  FL  P    LN  P  ++ATK MA++D LSTHSPDEEYLG+   E    W  D    AA   F   +   E  I+       R N  G
Sbjct:  683 YPYANDGLLLWSAIRSWVESYVQLYYPDAGTVQCDLELQGWYHESIHVGHGDLRHAPWWPPLSTPVDLASILTTLVWLASAQHAALNFGQYPLGGYVPNRPPLIRRLLPDLERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCG 890          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.115e-48
Identity = 89/205 (43.41%), Postives = 127/205 (61.95%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDAGCRSQLR*NELG 615
            YP+ANDGL +W AI+QW T+Y+  YYP+  +++ D ELQAWW E+R VGHGD K   WWP +KT  +L++   TI+W+ S  HAAVNFGQY Y GY PNRP+ +R  +   +P  +++      PE   + T   Q+QA   +++L++LS HS DE YLG+   P W  D     AF++F  +L E+E  + A  +   R N +G
Sbjct:  634 YPYANDGLAVWHAIEQWATEYLAIYYPNDGVLQGDAELQAWWKEVREVGHGDIKDATWWPEMKTVAELVKACATIIWIGSALHAAVNFGQYPYAGYLPNRPSVSRRPM--PEPGTKEYDELARDPEKVFVRTITKQMQAIVGISLLEILSKHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVG 836          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.245e-48
Identity = 90/187 (48.13%), Postives = 122/187 (65.24%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMEL 561
            YPFA DGL++W AIK WVT+Y   YY +   V++D E+Q+WWTE+RT GHGDK+HE WWP ++T  DLIE  T I+W+ S  HAAVNFGQY Y G+ PNRPT +R  +   +P  +++    E  + A L T   Q+Q    ++I+++LS HS DE YLG+   P W  D     AF++F GK +EL
Sbjct:  651 YPFAVDGLEIWSAIKTWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESWWPSMQTRDDLIETCTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRFM--PEPGTDEYAELEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRF-GKELEL 834          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.239e-48
Identity = 91/203 (44.83%), Postives = 125/203 (61.58%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGII-----DAGCRSQ 594
            YP+A DGL++W AI+QWV +Y+  YY D  ++  D ELQAWW E+R VGHGD K   WWP +    +L +  TTI+W+ S  HAAVNFGQY Y GY PNRPT +R  +   +P  E +      PE A + T  SQ+Q    +++++VLS HS DE YLG+   PAW  D     AF +F  +L+E+EG +     DAG +++
Sbjct:  630 YPYAADGLEIWHAIEQWVGEYLAIYYTDDGVLRGDAELQAWWAEVREVGHGDLKGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRRM--PEPGTEAYGELGRDPERAFIRTITSQLQTIIGISLIEVLSKHSSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNR 830          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 4.239e-48
Identity = 86/188 (45.74%), Postives = 121/188 (64.36%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A DGL +W AI+QWVT+Y   YYP+  +++ D ELQAWW E+R VGHGD K   WWP +++  +L +  TTI+W+ S  HAAVNFGQY Y GY PNRPT +R  +   +P  +++    E PE   + T  SQ Q    ++++++LS HS DE YLG+   P W  DP    AF++F  +L+E+E
Sbjct:  627 YPYATDGLAIWQAIEQWVTEYCAIYYPNDGVLQGDVELQAWWKEVREVGHGDLKDADWWPKMQSLPELTKACTTIIWIASALHAAVNFGQYPYAGYLPNRPTISRRPM--PEPGSKEYTELDENPEKFFIRTITSQFQTILGVSLIEILSKHSADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIE 812          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.611e-47
Identity = 86/188 (45.74%), Postives = 123/188 (65.43%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A DGL +W AI+Q+V++Y+  YYP+  +++ D E+QAWW E R VGHGD K  PWWP +++  +L +  TTI+W+ S  HAAVNFGQY Y G+ PNRPT +R  +   +P  E++      PE A ++T  SQIQ    +++L+VLS HS DE YLG+   P W  DP     F++F  +L+E+E
Sbjct:  626 YPYAADGLAIWHAIEQYVSEYLAIYYPNDGVLQGDTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGSALHAAVNFGQYPYAGFLPNRPTVSRRRM--PEPGTEEYAELERDPERAFIHTITSQIQTIIGVSLLEVLSKHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIE 811          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.038e-46
Identity = 91/194 (46.91%), Postives = 125/194 (64.43%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATED-PSDEQWKFFLEK-PENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIID 576
            YP+A DGL++W AI+ WV DY+  +Y  +  +++D ELQAWW E+R  GHGDKK EPWWP ++T ++L+E  T I+WV S  HAAVNFGQY   GY PNRPT +R  +  E+ P  E+    LEK P+   L T  +Q+Q    ++++++LSTHS DE YLG+     W  +     AFEKF  K+ E+E  ID
Sbjct:  629 YPYAVDGLEVWYAIESWVRDYIFLFYKIEEDIQTDTELQAWWKEVREEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGYLPNRPTISRQYMPKENTPEFEE----LEKNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNID 818          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.838e-46
Identity = 88/193 (45.60%), Postives = 120/193 (62.18%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDA 579
            YP+A DGL++WDAIK WV +YV+ YYP  + V+ D ELQAWW E    GHGD K +PWWP ++T +DLI+  + IVW  S  HAAVNFGQY YGG   NRPT AR  I  E     ++   ++ P+ A L T   + +    ++++++LS H+ DE YLG+   P W  D     AF++F  KL  +EG I+A
Sbjct:  634 YPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKMQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAE--GTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINA 824          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.838e-46
Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A DGL++W  IK WV DYV+ YY     +  D ELQAWW E+  VGHGDKK+EPWWP ++T +DLIE+ + ++W  S  HAAVNFGQY YGG   NRPT +R  +   +    +++  ++ P+ A L T   + Q    ++++++LS H+ DE YLG+   P W  D     AF+KF  KL E+E
Sbjct:  631 YPYAVDGLEIWAIIKTWVQDYVSLYYTSDEKLRQDSELQAWWKELVEVGHGDKKNEPWWPKMQTREDLIEVCSIVIWTASALHAAVNFGQYSYGGLILNRPTLSRRFM--PEKGSAEFEELVKSPQKAYLKTITPKFQTLIDLSVIEILSRHASDELYLGERDNPNWTSDKRALEAFKKFGNKLAEIE 816          
The following BLAST results are available for this feature:
BLAST of CX295551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
LOX3_ARATH2.248e-4947.67Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOX6_ORYSJ1.115e-4847.12Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX2_ORYSJ1.115e-4843.41Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOX5_ARATH3.245e-4848.13Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOX3_ORYSJ4.239e-4844.83Putative lipoxygenase 3 OS=Oryza sativa subsp. jap... [more]
LOX1_ORYSJ4.239e-4845.74Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=... [more]
LOX1_HORVU1.611e-4745.74Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 S... [more]
LOX1_ARATH3.038e-4646.91Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=... [more]
LOXX_SOYBN8.838e-4645.60Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV... [more]
LOX3_PEA8.838e-4644.68Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05073D08SK DroRLeaf1 Citrus clementina cDNA clone C05073D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295551 ID=CX295551; Name=CX295551; organism=Citrus clementina; type=EST; length=636bp
TATCCTTTTGCCAATGATGGCCTTGATCTCTGGGATGCCATAAAACAATG
GGTTACCGATTATGTTAATCACTACTACCCTGATAAAAGCCTTGTAGAAT
CTGATGAAGAGCTCCAAGCTTGGTGGACTGAAATTCGAACTGTGGGACAC
GGTGACAAGAAACATGAACCTTGGTGGCCTGTCTTGAAAACCCCTAAGGA
TTTAATTGAAATCATCACAACTATTGTTTGGGTAACATCTGGTCACCACG
CAGCTGTTAACTTCGGCCAATACATTTACGGAGGCTATTTCCCCAATAGG
CCAACCACTGCAAGATGCAACATTGCCACTGAAGATCCATCTGATGAACA
ATGGAAATTCTTCCTTGAAAAACCTGAAAATGCACTTTTGAATACCTTCC
CTTCCCAGATTCAAGCTACTAAAGTTATGGCTATTCTTGATGTTTTATCG
ACTCATTCTCCTGATGAGGAGTATTTAGGAAAAGAAATAGAGCCAGCATG
GCGTGAGGATCCGGTTATAAATGCAGCATTTGAAAAGTTTAGAGGCAAGT
TAATGGAGCTTGAAGGGATTATTGATGCAGGATGCAGATCCCAGTTGAGA
TAGAATGAGCTGGGATGGGCATATGACTCTTGAGCA
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