CX295551

Overview
NameCX295551
Unique NameCX295551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length636
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.969e-45
Identity = 90/205 (43.90%), Postives = 114/205 (55.61%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDAGCRSQLR*NELG 615
            YP+A DGL LW AI +W   YV  YYP    V++D ELQ+W+ E    GH DK+  PWWP L TP DL  ++TT+VW+ S  HAA+NFGQY  GGY PNRP   R  +  E   D ++   +  P    L+  PS  Q T  M ++D LSTHS DEEYLG+  + AW  DP   AA  +F   +   E  I+       R N  G
Sbjct:  669 YPYAADGLLLWSAISRWCEAYVAAYYPSDEAVQADYELQSWYAEAVQSGHADKRGAPWWPRLSTPGDLASLLTTLVWLCSAQHAALNFGQYPLGGYIPNRPPLMRRLVPAE--GDPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCG 871          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.729e-45
Identity = 83/188 (44.15%), Postives = 116/188 (61.70%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A DGL++WD I+ WV DYV+ YYP    V+ D ELQAWW E    GHGD K +PWWP L TP+DLI   + I+W+ S  HAAVNFGQY YGG+  NRPT  R  +   +P  +++       + A L T   +++A   ++++++LS H+ DE YLG+   P W  +     AF++F  KL E+E
Sbjct:  631 YPYAVDGLEIWDTIQTWVKDYVSLYYPTNDAVKKDTELQAWWKEAVEKGHGDLKDKPWWPKLNTPQDLIHTCSIIIWIASALHAAVNFGQYPYGGFILNRPTITRRLL--PEPGTKEYGELTSNYQKAYLRTITGKVEAIVDLSVIEILSRHASDEVYLGQRDNPNWTNNIKALQAFKRFGQKLKEIE 816          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.482e-45
Identity = 86/191 (45.03%), Postives = 116/191 (60.73%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGII 573
            YP+A DGL++W AIK WVT+Y   YY     VE D ELQAWW E+R  GHGDKK E WWP L+T ++L +  T I+W+ S  HAA++FG Y Y GY PNRPT + CN+  E P   +++     P+   L TF  Q+Q+   ++I +V S H+ DE YLG+     W +D     AFE+F   L ++E  I
Sbjct:  629 YPYAVDGLEIWAAIKSWVTEYCKFYYKSDETVEKDTELQAWWKELREEGHGDKKDEAWWPKLQTRQELRDCCTIIIWIASALHAALHFGLYSYAGYLPNRPTLS-CNLMPE-PGSVEYEELKTNPDKVFLKTFVPQLQSLLEISIFEVSSRHASDEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRI 817          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.272e-44
Identity = 87/205 (42.44%), Postives = 122/205 (59.51%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDAGCRSQLR*NELG 615
            YP+A DGL++W AIK WV +YV+ YY     V+ D ELQ WW E    GHGD K +PWWP L+T ++L+EI T I+W  S  HAAVNFGQY YGG+  NRPT++R  +   +    +++  ++  + A L T  S+ Q    ++++++LS H+ DE YLG+   P W  D     AF+KF  KL E+E  +      Q   N LG
Sbjct:  636 YPYAVDGLEIWAAIKTWVQEYVSLYYARDDDVKPDSELQQWWKEAVEKGHGDLKDKPWWPKLQTIEELVEICTIIIWTASALHAAVNFGQYPYGGFILNRPTSSRRLL--PEKGTPEYEEMVKSHQKAYLRTITSKFQTLVDLSVIEILSRHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLG 838          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.411e-43
Identity = 83/188 (44.15%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A DGL++W AIK WV +YV  YY     V++D ELQ WW E    GHGD K +PWWP L+T +DL+E+   I+W+ S  HAAVNFGQY YGG   NRPT +R  +   +    +++  +   E A L T  S++     ++++++LSTH+ DE YLG+   P W  D     AF+KF  KL E+E
Sbjct:  608 YPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLL--PEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIE 793          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.407e-43
Identity = 82/188 (43.62%), Postives = 116/188 (61.70%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A DGL++W AIK WV DYV+ YY   + +++D ELQ WW E+   GHGD K +PWWP L+T  +L+E+ T I+W  S  HAAVNFGQY YGG   NRPT +R  +  E  +  ++   ++  + A L T   + Q    ++++++LS H+ DE YLG+   P W  D     AF+KF  KL E+E
Sbjct:  634 YPYAVDGLEIWTAIKTWVQDYVSLYYATDNDIKNDSELQHWWKEVVEKGHGDLKDKPWWPKLQTFDELVEVCTIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRLLPEEGTA--EYDEMVKSSQKAYLRTITPKFQTLIDLSVIEILSRHASDEVYLGQRENPHWTSDSKALQAFQKFGNKLAEIE 819          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.362e-43
Identity = 82/194 (42.27%), Postives = 120/194 (61.86%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENA---LLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGII 573
            YP+A DGL +W AI++WV +Y+  YYP+  ++  DEELQAWW E+R VGHGD K + WWP + T ++L    T I+W+ S  HAAVNFGQY Y G+ PNRPT +R  +   +P  E++       + A    ++T  SQ Q    ++++++LS HS DE YLG+   P W  D     AF++F  +L+++E  I
Sbjct:  637 YPYAVDGLVIWWAIERWVGEYLAIYYPNDGVLRGDEELQAWWKEVREVGHGDLKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRPM--PEPGTEEYAKLERGGDEADLVFIHTITSQFQTILGISLIEILSKHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRI 828          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.146e-43
Identity = 81/188 (43.09%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A DGL++WDAIK WV +YV  YY     +  D ELQA W E+  VGHGDKK+EPWWP ++T ++L+E    I+W  S  HAAVNFGQY YGG   NRPT +R  +   +    +++   + P+ A L T   + Q    ++++++LS H+ DE YLG+   P W  D     AF++F  KL ++E
Sbjct:  627 YPYAVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFM--PEKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIE 812          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOXB_PHAVU (Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.661e-42
Identity = 79/189 (41.80%), Postives = 118/189 (62.43%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLG-KEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A+DGL++WDAIK WV +YV  YY    +++ D ELQAWW E+  VGHGD K +PWWP +++ ++L+E+ TT++W+ S  HAAVNFGQY YGG   NRPT +R  +   +    ++    + PE   L T   + +    + ++++LS H+ DE YLG ++    W  D     AF++F  KL E+E
Sbjct:  516 YPYASDGLEIWDAIKSWVVEYVAFYYKSDEVLQQDSELQAWWKELVQVGHGDLKDKPWWPKMQSRENLVEVSTTLIWIASALHAAVNFGQYPYGGLILNRPTISRRFM--PEKGSAEYAALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDEIYLGERDGGDHWTSDAGPLEAFKRFGKKLAEIE 702          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.907e-40
Identity = 82/189 (43.39%), Postives = 114/189 (60.32%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIE-PAWREDPVINAAFEKFRGKLMELE 564
            YP+A+DGL++W AIK WV +YVN YY   + +  D ELQA+W E+  VGHGD K   WW  ++  K+LIE  + ++W+ S  HAAVNFGQY YGGY  NRPT +R  +   +    ++    +  E A L T   +      + I++VLS H+ DE+YLG+ IE   W  D V   AF++F  KL E+E
Sbjct:  635 YPYASDGLEIWAAIKSWVEEYVNFYYKSDAAIAQDAELQAFWKELVEVGHGDLKSATWWFKMQNRKELIEACSILIWIASALHAAVNFGQYPYGGYILNRPTKSRKFM--PEKGTPEYDDLAKNYEKAYLRTITPKNDTLTDLTIIEVLSRHASDEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIE 821          
The following BLAST results are available for this feature:
BLAST of CX295551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
LOX5_ORYSJ1.969e-4543.90Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]
LOXA_PHAVU5.729e-4544.15Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 ... [more]
LOXB_SOLLC7.482e-4545.03Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]
LOX2_SOYBN8.272e-4442.44Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOX1_SOYBN1.411e-4344.15Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 ... [more]
LOX2_PEA2.407e-4343.62Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=... [more]
LOX4_ORYSJ5.362e-4342.27Probable lipoxygenase 4 OS=Oryza sativa subsp. jap... [more]
LOX3_SOYBN9.146e-4343.09Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 ... [more]
LOXB_PHAVU2.661e-4241.80Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2... [more]
LOX1_LENCU1.907e-4043.39Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05073D08SK DroRLeaf1 Citrus clementina cDNA clone C05073D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295551 ID=CX295551; Name=CX295551; organism=Citrus clementina; type=EST; length=636bp
TATCCTTTTGCCAATGATGGCCTTGATCTCTGGGATGCCATAAAACAATG
GGTTACCGATTATGTTAATCACTACTACCCTGATAAAAGCCTTGTAGAAT
CTGATGAAGAGCTCCAAGCTTGGTGGACTGAAATTCGAACTGTGGGACAC
GGTGACAAGAAACATGAACCTTGGTGGCCTGTCTTGAAAACCCCTAAGGA
TTTAATTGAAATCATCACAACTATTGTTTGGGTAACATCTGGTCACCACG
CAGCTGTTAACTTCGGCCAATACATTTACGGAGGCTATTTCCCCAATAGG
CCAACCACTGCAAGATGCAACATTGCCACTGAAGATCCATCTGATGAACA
ATGGAAATTCTTCCTTGAAAAACCTGAAAATGCACTTTTGAATACCTTCC
CTTCCCAGATTCAAGCTACTAAAGTTATGGCTATTCTTGATGTTTTATCG
ACTCATTCTCCTGATGAGGAGTATTTAGGAAAAGAAATAGAGCCAGCATG
GCGTGAGGATCCGGTTATAAATGCAGCATTTGAAAAGTTTAGAGGCAAGT
TAATGGAGCTTGAAGGGATTATTGATGCAGGATGCAGATCCCAGTTGAGA
TAGAATGAGCTGGGATGGGCATATGACTCTTGAGCA
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