CX295551

Overview
NameCX295551
Unique NameCX295551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length636
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11767 contig Ccv1_Contig11767:2074..2709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.247e-40
Identity = 80/189 (42.33%), Postives = 114/189 (60.32%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLG-KEIEPAWREDPVINAAFEKFRGKLMELE 564
            YP+A+DGL++WDAIK WV +YV+ YY     ++ D ELQAWW E+  VGHGD K +PWW  ++T ++L+E    ++W+ S  HAAVNFGQY YGG   NRPT +R     E  S E +    + PE   L T   + +    + ++++LS H+ DE YLG ++    W  D     AF++F  KL E+E
Sbjct:  622 YPYASDGLEIWDAIKSWVQEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASAILIWIASALHAAVNFGQYPYGGLILNRPTISR-RFMPEKGSPE-YDALAKNPEKEFLKTITGKKETLIDLTVIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIE 808          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: AOSL_PLEHO (Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17
Identity = 57/190 (30.00%), Postives = 102/190 (53.68%), Query Frame = 1
Query:    7 FANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRT----VGHGDKKHEPWWPV-LKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMEL 561
            + +DGL LW+AI+ ++ + +  +Y +   V+ D E+Q+W  ++      V  G + H    P   ++ + L E++T++V+  S  HAAVNF Q  + G+ PN P   R       P  ++ +  L+    ++L+T PS+ QA K +A + +L+  S DE YLG     AW +   ++ A  +F+ KL ++
Sbjct:  860 YRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDHGV--PASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAVLR-----HPPPKKKGEATLQ----SILSTLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWEDKDALD-AINRFQDKLEDI 1037          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 3.869e-17
Identity = 57/191 (29.84%), Postives = 98/191 (51.31%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGII 573
            Y + +DGL +W+AI+ + T+ V+ YY D  +VE D+ELQ +  ++   G   +K   +   +K+ + L E +T +++  S  HAAVNFGQY +  + PN P T R       P   +    +E+    +++T P + ++   +  +  LS    +E +LG   E  + E PV   A  +FR  L  +  +I
Sbjct:  468 YFYRDDGLLVWEAIQSFTTEVVSIYYEDDQVVEEDQELQDFVKDVYVYGMRGRKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPV-KEAMIRFRKNLEAIVSVI 648          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX5_MOUSE (Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.278e-16
Identity = 56/191 (29.32%), Postives = 97/191 (50.79%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGII 573
            Y + +DGL +W+AI+ +  + V+ YY +  +VE D+ELQ +  ++   G   KK   +   +K+ + L E +T +++  S  HAAVNFGQY +  + PN P T R       P   +    +E+    +++T P + ++   +  +  LS    +E +LG   E  + E PV   A  +FR  L  +  +I
Sbjct:  469 YFYRDDGLLVWEAIQSFTMEVVSIYYENDQVVEEDQELQDFVKDVYVYGMRGKKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPV-KEAMIRFRKNLEAIISVI 649          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOXE3_HUMAN (Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=ALOXE3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.587e-16
Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 315
            Y + +DGL +W AI+ +V++ V +YYP  + V+ D ELQAW  EI       ++   +   L TP ++++ +T I++  S  HAAVN GQ+ +G + PN P++ R
Sbjct:  506 YHYRDDGLKIWAAIESFVSEIVGYYYPSDASVQQDSELQAWTGEIFAQAFLGRESSGFPSRLCTPGEMVKFLTAIIFNCSAQHAAVNSGQHDFGAWMPNAPSSMR 610          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX5_MESAU (Arachidonate 5-lipoxygenase OS=Mesocricetus auratus GN=ALOX5 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.587e-16
Identity = 55/191 (28.80%), Postives = 97/191 (50.79%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGII 573
            Y + +DGL +W+AI+ + ++ V+ YY D  +V  D+ELQ +  ++   G   +K   +   +K+ + L E +T +++  S  HAAVNFGQY +  + PN P T R       P+  +    +E+    ++ T P + ++   +  +  LS    +E +LG   E  + E PV   A  +FR  L  +  +I
Sbjct:  468 YFYRDDGLLVWEAIQSFTSEVVSIYYEDDQVVMEDQELQDFVKDVYVYGMRGRKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRA-----PPATAKGVVTIEQ----IVATLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPV-KEAMTRFRKNLEAIVNVI 648          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOX5_HUMAN (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.297e-16
Identity = 55/191 (28.80%), Postives = 95/191 (49.74%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGII 573
            Y + +DGL +W+AI+ +  + V+ YY    +VE D ELQ +  ++   G   +K   +   +K+ + L E +T +++  S  HAAVNFGQY +  + PN P T R       P   +    +E+    +++T P + ++   +  +  LS    +E +LG   E  + E PV   A  +FR  L  +  +I
Sbjct:  469 YFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRA-----PPPTAKGVVTIEQ----IVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPV-KEAMARFRKNLEAIVSVI 649          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LOXE3_MOUSE (Epidermis-type lipoxygenase 3 OS=Mus musculus GN=Aloxe3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.622e-15
Identity = 39/105 (37.14%), Postives = 65/105 (61.90%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 315
            Y + +DGL +W AI+++V++ V++YYP  + V+ D ELQAW  EI       ++   +   L TP +L++ +T I++  S  HAA N GQ+ +G + PN P++ R
Sbjct:  506 YHYRDDGLKIWAAIERFVSEIVSYYYPSDASVQQDCELQAWVGEIFAQAFLGRESSGFPSRLCTPGELVKYLTAIIFNCSAQHAAFNSGQHDFGAWMPNAPSSMR 610          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LX15B_MOUSE (Arachidonate 15-lipoxygenase B OS=Mus musculus GN=Alox15b PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.730e-15
Identity = 60/208 (28.85%), Postives = 102/208 (49.04%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDAGCRSQLR*NELGWAY 624
            Y + +DG+ +W AIK +V++ V+ YYP  + V+ D+ELQAW  EI + G   ++      +L T + L++ IT +++  S  HAAV+ GQ+    + PN P T +    T             +PE + + T P+   ++  +  L +LS    D+  LG   +  + ED     +   F+ KL++    I  G R + R   L + Y
Sbjct:  472 YYYRDDGMQIWGAIKSFVSEIVSIYYPSDTSVQDDQELQAWVREIFSEGFLGRESSGMPSLLDTREALVQYITMVIFTCSAKHAAVSSGQFDSCVWMPNLPPTMQLPPPTSKGQ--------ARPE-SFIATLPAVNSSSYHIIALWLLSAEPGDQRPLGHYPDEHFTED-APRRSVAAFQRKLIQ----ISKGIRERNRGLALPYTY 665          
BLAST of CX295551 vs. ExPASy Swiss-Prot
Match: LX12B_RAT (Arachidonate 12-lipoxygenase, 12R type OS=Rattus norvegicus GN=Alox12b PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 1
Query:    1 YPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTAR 315
            Y F +D L +W A++++VT+ + +YYP+ + VE D ELQ W  EI      +++   +   L+T  +LIE +T +++  S  HAAVN GQ  Y  + PN P++ R
Sbjct:  496 YYFRDDSLAVWYAMERYVTEIITYYYPNDAAVEGDPELQCWVQEIFKECLLERESSGFPTCLRTVPELIEYVTMVMYTCSARHAAVNTGQLEYTSWMPNFPSSMR 600          
The following BLAST results are available for this feature:
BLAST of CX295551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
LOX4_SOYBN7.247e-4042.33Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]
AOSL_PLEHO2.268e-1730.00Allene oxide synthase-lipoxygenase protein OS=Plex... [more]
LOX5_RAT3.869e-1729.84Arachidonate 5-lipoxygenase OS=Rattus norvegicus G... [more]
LOX5_MOUSE4.278e-1629.32Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alo... [more]
LOXE3_HUMAN5.587e-1637.14Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=A... [more]
LOX5_MESAU5.587e-1628.80Arachidonate 5-lipoxygenase OS=Mesocricetus auratu... [more]
LOX5_HUMAN7.297e-1628.80Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
LOXE3_MOUSE3.622e-1537.14Epidermis-type lipoxygenase 3 OS=Mus musculus GN=A... [more]
LX15B_MOUSE4.730e-1528.85Arachidonate 15-lipoxygenase B OS=Mus musculus GN=... [more]
LX12B_RAT1.054e-1437.14Arachidonate 12-lipoxygenase, 12R type OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionC05073D08SK DroRLeaf1 Citrus clementina cDNA clone C05073D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295551 ID=CX295551; Name=CX295551; organism=Citrus clementina; type=EST; length=636bp
TATCCTTTTGCCAATGATGGCCTTGATCTCTGGGATGCCATAAAACAATG
GGTTACCGATTATGTTAATCACTACTACCCTGATAAAAGCCTTGTAGAAT
CTGATGAAGAGCTCCAAGCTTGGTGGACTGAAATTCGAACTGTGGGACAC
GGTGACAAGAAACATGAACCTTGGTGGCCTGTCTTGAAAACCCCTAAGGA
TTTAATTGAAATCATCACAACTATTGTTTGGGTAACATCTGGTCACCACG
CAGCTGTTAACTTCGGCCAATACATTTACGGAGGCTATTTCCCCAATAGG
CCAACCACTGCAAGATGCAACATTGCCACTGAAGATCCATCTGATGAACA
ATGGAAATTCTTCCTTGAAAAACCTGAAAATGCACTTTTGAATACCTTCC
CTTCCCAGATTCAAGCTACTAAAGTTATGGCTATTCTTGATGTTTTATCG
ACTCATTCTCCTGATGAGGAGTATTTAGGAAAAGAAATAGAGCCAGCATG
GCGTGAGGATCCGGTTATAAATGCAGCATTTGAAAAGTTTAGAGGCAAGT
TAATGGAGCTTGAAGGGATTATTGATGCAGGATGCAGATCCCAGTTGAGA
TAGAATGAGCTGGGATGGGCATATGACTCTTGAGCA
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