CX295556

Overview
NameCX295556
Unique NameCX295556
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11750 contig Ccv1_Contig11750:38..752. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACAN (Chaperone protein dnaJ OS=Bacillus anthracis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACAC (Chaperone protein dnaJ OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACAA (Chaperone protein dnaJ OS=Bacillus anthracis (strain A0248) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_EXISA (Chaperone protein dnaJ OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+ +SA+  DIKRAYR LAR+YHPD+++++ A + FK I  AYEVLS+E  R +YDR
Sbjct:    5 DYYEVLGLDKSASAQDIKRAYRKLARQYHPDINQEADAADKFKEIGEAYEVLSDEQKRAQYDR 67          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D Y++LGV++SA   ++KRAYR LARKYHPDV+K+  A E FK I  AYEVLS+   R  YDR
Sbjct:    4 DFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANYDR 66          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_OCEIH (Chaperone protein dnaJ OS=Oceanobacillus iheyensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 34/66 (51.52%), Postives = 52/66 (78.79%), Query Frame = 2
Query:  191 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            G+ D+Y++LG+ +SA+  +IK+ YR LARKYHPDV+K++ A E FK ++ AYEVLS++  R +YD+
Sbjct:    2 GKRDYYEILGIDKSASQDEIKKNYRKLARKYHPDVNKEADAAEKFKEVKEAYEVLSDDQKRAQYDQ 67          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP8 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 8801) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 36/63 (57.14%), Postives = 48/63 (76.19%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+ LGV ++A+  DIKRAYR LARKYHPD++K++ A + FK I  AYEVLS   TR +YD+
Sbjct:    4 DYYETLGVDRNASKEDIKRAYRRLARKYHPDINKEAGAEDRFKEINRAYEVLSEPETRARYDQ 66          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP6 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y++LGVA+ A   +IKRAYR LARKYHPDV+K+  A + FK I  AYEVLS   TR +YD+
Sbjct:    4 DYYQLLGVARDADKDEIKRAYRRLARKYHPDVNKEPGAEDKFKEINRAYEVLSEPETRARYDQ 66          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_EXIS2 (Chaperone protein dnaJ OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLGVA+ A+ A+IKRAYR LAR YHPDV+K++ A + FK +  AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGVARDASAAEIKRAYRKLARTYHPDVNKEADADQKFKELSEAYEVLSDDNQRARYDQ 67          
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAA5 (Chaperone protein dnaJ OS=Cyanothece sp. (strain ATCC 51142) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 2
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y +LGV ++A+  D+KRAYR LARKYHPDV+K+  A E FK I  AYEVLS   TR +YD+
Sbjct:    4 DYYDILGVDRNASKEDLKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPDTRSRYDQ 66          
The following BLAST results are available for this feature:
BLAST of CX295556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
DNAJ_BACAN1.871e-1353.97Chaperone protein dnaJ OS=Bacillus anthracis GN=dn... [more]
DNAJ_BACAC1.871e-1353.97Chaperone protein dnaJ OS=Bacillus anthracis (stra... [more]
DNAJ_BACAA1.871e-1353.97Chaperone protein dnaJ OS=Bacillus anthracis (stra... [more]
DNAJ_EXISA2.444e-1357.14Chaperone protein dnaJ OS=Exiguobacterium sp. (str... [more]
DNAJ_THEEB3.192e-1358.73Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_OCEIH3.192e-1351.52Chaperone protein dnaJ OS=Oceanobacillus iheyensis... [more]
DNAJ_CYAP83.192e-1357.14Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_SYNP64.168e-1358.73Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_EXIS24.168e-1357.14Chaperone protein dnaJ OS=Exiguobacterium sibiricu... [more]
DNAJ_CYAA54.168e-1358.73Chaperone protein dnaJ OS=Cyanothece sp. (strain A... [more]

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Properties
Property NameValue
Genbank descriptionC05073E01SK DroRLeaf1 Citrus clementina cDNA clone C05073E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295556 ID=CX295556; Name=CX295556; organism=Citrus clementina; type=EST; length=715bp
GAGGCTCCTGGTGGGACCCATAACTCCCACTACCGGCTCCGATGCGTTCT
CCTCCATCATCAAAAACAGTTTCCTGATCTCCTCTCCTCGCCGCAGCACC
ACCGGCAGTAACCGCAACAGAAGAACCCGCCACCGCTTGGTGGTCGCGTC
ATCGTCTTGGTCATCATCCGCCGCGGCGGCGGCCATAAACGGCGAGCCGG
ACCATTACAAAGTTCTGGGCGTCGCTCAAAGTGCCACGCTAGCTGATATT
AAGAGGGCTTATCGCCTCCTCGCTCGTAAGTATCATCCCGACGTTAGCAA
GGATTCACGAGCGGTTGAAGTGTTCAAGACCATCCGTTGTGCTTATGAAG
TATTATCTAATGAAGTAACAAGAATTAAGTATGATCGGGCACTCAAATTT
CGAACGGATAGTGACAGATCACGTAGAGGAAACAGGAGGTACAGCAGTGA
ATTTGAAGACGGGGTAAGGATCTCTACATGGGCTGAACTGAGGCGAAAAC
TTCAATATGAGAGATATTGGAAAAATTATAACTCAAAAGAAGAGTATTCT
TCCTTCTATCGTAAAGCACCAGTCCGGGAAGTTCAAGAGGAAAACCCAGG
TGATAAGAGAGGCTCCTTTACTGCAGTGCTAAGATCAGCATTTATCTCTT
TATTCTTACTGAAGGTCTTTGGGTCCCAACTATCCCTCACTTTTAGTAGC
CTCACGGCTTTGTTT
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