CX295574
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: RAD26_MOUSE (Putative DNA repair and recombination protein RAD26-like OS=Mus musculus GN=Rad26l PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.267e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 3 Query: 12 NRVIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKA 227 N VI+FDP WNP+ D+QA +RA+RIGQ +DV V RLI+ GT+EE +Y RQ+YK L ++ + +R+F+A Sbjct: 594 NVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAKRYFEA 665
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: RAD26_HUMAN (Putative DNA repair and recombination protein RAD26-like OS=Homo sapiens GN=RAD26L PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.267e-14 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 3 Query: 12 NRVIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKA 227 N V++FDP WNP+ D+QA +RA+RIGQ +DV V RLI+ GT+EE +Y RQIYK L ++ + +R+F+A Sbjct: 607 NVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAKRYFEA 678
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: BTAF1_HUMAN (TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 18 VIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQR-RFFKARNMKDLFTLNDDGNGGSTETS 290 V+ + DWNP D+QA +RA RIGQK+ V VYRLITRGT+EEK+ Q +K + N ++ + + DLFTL+ DG +TS Sbjct: 1721 VVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLDKDGKAEKADTS 1812
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: ATRX_CAEEL (Transcriptional regulator ATRX homolog OS=Caenorhabditis elegans GN=xnp-1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.341e-12 Identity = 32/79 (40.51%), Postives = 51/79 (64.56%), Query Frame = 3 Query: 12 NRVIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARNMKDLF 248 NRVIIFD WNPS D Q+ R +R GQ + V +YR I +GT+EE++Y RQ+ K + +++ Q +R + ++ +L+ Sbjct: 1063 NRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDEAQIQRHYLGNDLTELY 1141
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: ATRX_DROME (Transcriptional regulator ATRX homolog OS=Drosophila melanogaster GN=XNP PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.993e-12 Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 3 Query: 12 NRVIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARNMKDLFT 251 NRV+IFD WNPS D Q+ R +R GQ + +YRLI GT+E+KVY RQ+ K +++ Q R + ++ +L++ Sbjct: 1010 NRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQTDLMELYS 1089
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: CHD2_HUMAN (Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11 Identity = 30/60 (50.00%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 18 VIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILK 197 V+IFD DWNP D+QA+ RA RIGQK+ V +YRL+T+GT+EE++ R K L + +++ Sbjct: 882 VVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQ 941
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: DOM_DROME (Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = 3 Query: 18 VIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ-QRRFFKARNMKDLFTLNDDGNGGSTE 284 VI +D DWNP+ D QA++R RIGQ +DV +YRL++ TIE + + K L++ ++ +FK+ +KDLFT+ S++ Sbjct: 1748 VIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTIKDLFTMEQSEQDESSQ 1837
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: ISW2_YEAST (ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces cerevisiae GN=ISW2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11 Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 3 Query: 18 VIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARNMKD 242 VI+FD DWNP D+QA +RA RIGQK+ V VYR +T IEEKV R K L +++ ++ N KD Sbjct: 581 VILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKD 655
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: INO80_SCHPO (Putative DNA helicase ino80 OS=Schizosaccharomyces pombe GN=ino80 PE=1 SV=4) HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11 Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 3 Query: 18 VIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQR 212 VI +D DWNPS D QA +RA RIGQ++ VTVYR ITRGTIEE++ R K + ++ + R Sbjct: 1519 VIFYDSDWNPSIDSQAMDRAHRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGGETR 1583
BLAST of CX295574 vs. ExPASy Swiss-Prot
Match: INO80_NEOFI (Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.415e-11 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 3 Query: 18 VIIFDPDWNPSTDVQARERAWRIGQKQDVTVYRLITRGTIEEKVYHRQIYK 170 VI +D DWNP+ D QA +RA R+GQ + VTVYRLITRGTIEE++ R + K Sbjct: 1508 VIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRKRALQK 1558 The following BLAST results are available for this feature:
BLAST of CX295574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295574 ID=CX295574; Name=CX295574; organism=Citrus clementina; type=EST; length=662bpback to top |