CX295579

Overview
NameCX295579
Unique NameCX295579
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14984 contig Ccv1_Contig14984:265..988. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.483e-47
Identity = 97/226 (42.92%), Postives = 135/226 (59.73%), Query Frame = 2
Query:   26 RILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 691
            RI  LL SY V +    E  +   ER Y L  + K L+ +  G+S AP +L +    LM +W  + + VLD  I PF K +G  A+ Y+GK    N +    M   S   M  +++ Y+GF G+K LVDVGG  G  L MI  KH  + +GINFDLP V+A+A +  G+ H+GGDMF+S+P  DAIFMKW+L  W+D  C  +++NCYK+LP  GK+I  E +LP+
Sbjct:   70 RICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGI-PFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSL-KGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPE 293          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47
Identity = 102/240 (42.50%), Postives = 140/240 (58.33%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEHR----EFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDSTRVRGRV 718
            L R+LRLL SY + +       +   ER Y L  + K L  + +G+S A   L +    L+ +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K M+  S   M  +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDLP V+ +AP  PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E   PV PD S   +G V
Sbjct:   77 LDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGI-PFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSI-KGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVV 314          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45
Identity = 95/229 (41.48%), Postives = 132/229 (57.64%), Query Frame = 2
Query:   26 RILRLLTSYGVFSEHREFGGE----RKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIP-AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDS 697
            R+LRLL SY V     E G +    R+Y+   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV     +LD Y GF     +VDVGG  G  +  ++ +HP I  GIN+DLP V++EAP  PGV H+GGDMF S+P   DAI MKW+L  W+D+ C  +++NCY ALP  GK++  E VLP+ S
Sbjct:   83 RMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHI-RGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESS 309          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45
Identity = 96/232 (41.38%), Postives = 142/232 (61.21%), Query Frame = 2
Query:   20 LARILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACE---PVLPDDS 697
            L R+LRLL S+ V +   +  E G +R Y    +   L ++    S  P ++ HH   +M +W  +++ +L+  + PF + HG   + Y G     N +  + M+  ++  M  +LD Y+GF  VK LVDVGG+ G  + MI+ KH  I +GIN+DLP V+A+APS PGV H+GG+MF+SIP ADAIFMKWVL  W+D+ C  I+  CY++L  GGK+I  E   PV+P+D+
Sbjct:   79 LDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGV-PFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHI-KGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDN 308          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.552e-44
Identity = 95/229 (41.48%), Postives = 134/229 (58.52%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEH----REFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 694
            L R+LRLL SY V +       + G ER Y L+ +GK LV D      A +       AL+  W    EAV+D  I+ F  VHG   Y + GK  +MN +  K+M  V    M  +L+ Y GF+G+  LVDVGG +G  L +I+ K+P I +GINFDLP+V+  AP + G+ H+GGDMF S+P  DA+ +K V   W+D++C   + NC+KAL   GK+I  E +LP++
Sbjct:   85 LDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLI-KGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEE 312          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.350e-43
Identity = 94/227 (41.41%), Postives = 133/227 (58.59%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEH-REFGG---ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 688
            L R+LRLL SY V +   RE      ER Y L  + K L  + +G+S AP++L      L+  W  + +A+L+  I PF K +G   + Y+G     N +  K MS  S   M  +L+ Y+GF+G+  +VDVGG  G    MI+ K+P I   INFDLP V+ +AP+  GV H+GGDMF  +P  DAIF+KW+   W+D+ C  +++NCY ALP  GK+I  E +LP
Sbjct:   80 LDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGI-PFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSI-NAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.665e-39
Identity = 89/223 (39.91%), Postives = 122/223 (54.71%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 688
            L RILR+L +  + S      G R Y L E  + LV   + +S  P +L     A++ ++  + + VL+  + PF + HG   + Y GK+  +N    +AM   S      V   Y GF  +K LVDVGG  G  L  I+ KHP I  GINF+LP V+ +AP  PGV H+ GDMF+ +P A  I +KWVL  W DD    I++NC+KALP  G +I  E VLP
Sbjct:   96 LDRILRMLGASSILSVSTTKSG-RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHI-RGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLP 316          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 76/228 (33.33%), Postives = 119/228 (52.19%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGY-DGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPA-GGKLIACEPVLPDDS 697
            L RILR L    +    +   G++KY+L  I   L  +A+  S  P +L   Q   M+ W  + + + D     F K  G   + Y    P+ + L  + M+G +    +S++ G  D F+G+  LVDVGG  G  ++ I    P I +   FDLP V+A +  +P +  IGGDMFKS+P+A AI +K +L  W D++   I++ C  A+P  GGK+I  +  L ++S
Sbjct:   69 LYRILRYLVKMEILRVEKSDDGQKKYALEPIATLLSRNAKR-SMVPMILGMTQKDFMTPWHSMKDGLSDNGTA-FEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHI-KCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEES 293          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 75/224 (33.48%), Postives = 112/224 (50.00%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDG-FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPA-GGKLIACEPVL 685
            L R++R L    +F++     GE +Y L    K LV   +       +    +D  M+ W  + + +   +   F K  G   + Y  + PE N L  +AM+  S   M++++      F G+  LVDVGG  G  +R I    P I   + +DLP V+A++P    V  + GDMFK IP ADAI MK +L  W D EC  I++ C +A+P  GGK+I  + VL
Sbjct:   65 LYRVMRYLVHMKLFTK-ASIDGELRYGLAPPAKYLVKGWDKCMVGSILAITDKD-FMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTV-YDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL 285          
BLAST of CX295579 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 77/238 (32.35%), Postives = 117/238 (49.16%), Query Frame = 2
Query:   20 LARILRLLTSYGVFSEHREFGG-----ERKYSLTEIGKSLV-TDAEGLSYAPYVLQHHQDALMS------AWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFM-TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALP---AGGKLIACEPVL 685
            L R++R+LT+  VF      GG     E  Y+LT + + L+ + +  L+  P         ++S      AW   HE + DP I  F   HG   +         + L+   ++  S   +  ++    + F+G+  LVDVGG  G   + I +  P +   +  DL  VVA+AP+   V  I GDMF+SIP ADA+ +K VL  W  D+C  I++NC KA+P   AGGK+I    V+
Sbjct:   71 LRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQSSQLAQTPLAAMVLDPTIVSPFSELGAW-FQHE-LPDPCI--FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGAAAQAISKAFPHVKCSV-LDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVV 303          
The following BLAST results are available for this feature:
BLAST of CX295579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
COMT1_ZINEL4.483e-4742.92Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_ROSCH7.648e-4742.50Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT1_ORYSJ7.158e-4541.48Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IMT1_MESCR7.158e-4541.38Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
CHOMT_MEDSA3.552e-4441.48Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
IEMT_CLABR1.350e-4341.41(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
SMT_COPJA7.665e-3939.91(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
4OMT_COPJA1.958e-2633.333'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA1.552e-2333.48(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
ZRP4_MAIZE2.739e-2032.35O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC05073F12SK DroRLeaf1 Citrus clementina cDNA clone C05073F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295579 ID=CX295579; Name=CX295579; organism=Citrus clementina; type=EST; length=723bp
TTCGGCCGAGGGCCGAGAACTTGCACGTATCCTCCGCTTGCTCACCAGCT
ACGGCGTGTTCTCGGAGCATCGCGAGTTTGGAGGCGAAAGGAAGTACAGC
CTCACCGAGATCGGGAAATCCCTCGTTACTGATGCCGAGGGTCTATCGTA
CGCGCCCTACGTGCTCCAGCATCACCAGGACGCGCTTATGAGCGCGTGGC
CTTTGGTGCACGAGGCCGTTCTGGACCCAACTATTGAGCCATTTGTGAAA
GTCCATGGCGAGCCGGCATATAGTTATTATGGGAAGAAGCCTGAAATGAA
CGGCTTGATGCGAAAAGCCATGTCGGGAGTGTCCGTGCCGTTCATGACGT
CCGTTTTGGACGGTTACGATGGGTTCAAAGGTGTGAAGCGATTGGTTGAT
GTGGGTGGGAGTGCAGGTGATTGCCTGAGGATGATATTACAGAAACATCC
TTTTATATGTGAAGGGATCAATTTTGATTTGCCTGAGGTTGTTGCCGAAG
CTCCAAGTATCCCTGGAGTGACCCATATTGGTGGGGACATGTTTAAGTCC
ATTCCTGCCGCTGATGCTATCTTTATGAAGTGGGTTTTAACTACATGGAC
TGACGATGAATGCAAGCTGATAATGGAGAACTGTTACAAGGCTCTTCCGG
CAGGAGGAAAACTGATTGCTTGTGAGCCCGTGCTGCCTGATGATTCAACG
AGAGTCAGAGGACGCGTGCTCTC
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