CX295589

Overview
NameCX295589
Unique NameCX295589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB_MOUSE (Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.785e-53
Identity = 104/167 (62.28%), Postives = 131/167 (78.44%), Query Frame = 3
Query:  168 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            +LYNV+ GHRA++F+R  GV+D V  EGTH +IPW ++P+I+D R+RP  V   TGS DLQ V I LR+L RPVA QLP IY ++GE+Y+ERVLPSI  E LK+VVA+++A +LITQRE VSR++   LTERAA F + LDDVS+T LTFGKEFT A+EAKQVA QE
Sbjct:   26 ALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQE 192          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB2_BOVIN (Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.637e-53
Identity = 106/173 (61.27%), Postives = 133/173 (76.88%), Query Frame = 3
Query:  153 YAATHSLYNVEGGHRAIMFNRIVGVK-DKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            Y    S++ VEGGHRAI FNRI GV+ D +  EG H  IPWF+ P+IYD+RARP  + S TGS DLQMV I LRVL+RP A +LP++Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR  VS  IR+ LTERA  F++ LDDV+IT L+F +E+T A+EAKQVA QE
Sbjct:   34 YGIRESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAMELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQE 206          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: L2CC_DROME (Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2)37Cc PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 6.204e-53
Identity = 100/167 (59.88%), Postives = 127/167 (76.05%), Query Frame = 3
Query:  168 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            +LYNVEGGHRA++F+R  G+K+ V  EGTH  IPW +RP+I+D+R++P  V   TGS DLQ V I LR+L RP+ DQLP IY  LG++Y+ERVLPSI  E LKAVVAQ++A +LITQRE VS+ + + LT RA  F   LDD+S+T LTFG+EFT A+E KQVA QE
Sbjct:   26 ALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQE 192          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB_HUMAN (Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.102e-53
Identity = 103/167 (61.68%), Postives = 131/167 (78.44%), Query Frame = 3
Query:  168 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            +LYNV+ GHRA++F+R  GV+D V  EGTH +IPW ++P+I+D R+RP  V   TGS DLQ V I LR+L RPVA QLP I+ ++GE+Y+ERVLPSI  E LK+VVA+++A +LITQRE VSR++   LTERAA F + LDDVS+T LTFGKEFT A+EAKQVA QE
Sbjct:   26 ALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQE 192          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB_BOVIN (Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.102e-53
Identity = 103/167 (61.68%), Postives = 131/167 (78.44%), Query Frame = 3
Query:  168 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            +LYNV+ GHRA++F+R  GV+D V  EGTH +IPW ++P+I+D R+RP  V   TGS DLQ V I LR+L RPVA QLP I+ ++GE+Y+ERVLPSI  E LK+VVA+++A +LITQRE VSR++   LTERAA F + LDDVS+T LTFGKEFT A+EAKQVA QE
Sbjct:   26 ALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQE 192          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB2_CHICK (Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.382e-52
Identity = 106/173 (61.27%), Postives = 132/173 (76.30%), Query Frame = 3
Query:  153 YAATHSLYNVEGGHRAIMFNRIVGVK-DKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            Y    S++ VEGG RAI FNRI GV+ D +  EG H  IPWF+ P+IYD+RARP  + S TGS DLQMV I LRVLTRP A +LP++Y+ LG +Y ERVLPSI++E LK+VVA++NASQLITQR  VS  IR+ LTERA  F++ LDDV+IT L+F +E+T A+EAKQVA QE
Sbjct:   34 YGVRESVFIVEGGQRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLTRPNAAELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQE 206          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB_CHICK (Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.859e-52
Identity = 100/167 (59.88%), Postives = 130/167 (77.84%), Query Frame = 3
Query:  168 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            +LYNV+ GHRA++F+R  GV+D V  EGTH +IPW ++P+I+D R+RP  +   TGS DLQ V I LR+L RPV  QLP I+ ++GE+Y+ERVLPSI  E LK+VVA+++A +LITQRE VSR++ + LTERAA F + LDDVS+T LTFGKEFT A+E KQVA QE
Sbjct:   26 ALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQE 192          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB1_SCHPO (Prohibitin-1 OS=Schizosaccharomyces pombe GN=phb1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.764e-50
Identity = 97/167 (58.08%), Postives = 129/167 (77.25%), Query Frame = 3
Query:  168 SLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            S+Y+V GG RA++F+R+ GV+ +V  EGTH +IPW ++ ++YDVR RP  + +TTGS DLQMV + LRVL RP    LP IY+ LG +Y+ERVLPSI +E LK+VVAQ++A++LITQRE VS +IR+ L +RA  F I L+DVSIT +TFGKEFT A+E KQ+A QE
Sbjct:   25 SIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQKAIVYDVRTRPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVVAQFDAAELITQREVVSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQE 191          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB1_DICDI (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.868e-49
Identity = 95/170 (55.88%), Postives = 132/170 (77.65%), Query Frame = 3
Query:  159 ATHSLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            A  S+Y V+GG RA++F+RI GVK+K   EGTH ++PW ++P+I+D+R+ P  ++S TGS DLQ V + +RVL RP  + LP+I+  LG +Y+ER+LPS+ +E LK+VVAQY+A++LITQRE VS+EIR+ L +RA  FN+ LDDVSIT L+F ++FT AIE KQVA QE
Sbjct:   22 AQSSMYTVDGGQRAVIFDRISGVKEKSVGEGTHFIMPWLQKPIIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSLGNEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLDDVSITHLSFSQDFTNAIEHKQVAQQE 191          
BLAST of CX295589 vs. ExPASy Swiss-Prot
Match: PHB1_CAEEL (Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis elegans GN=phb-1 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.186e-49
Identity = 96/170 (56.47%), Postives = 126/170 (74.12%), Query Frame = 3
Query:  159 ATHSLYNVEGGHRAIMFNRIVGVKDKVYPEGTHLMIPWFERPVIYDVRARPNLVESTTGSHDLQMVKIGLRVLTRPVADQLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRETVSREIRKILTERAAYFNIALDDVSITSLTFGKEFTFAIEAKQVAAQE 668
            A  +LYNV+GG RA++F+R  GVK++V  EGTH +IPW ++P+I+D+R+ P  V + TGS DLQ V I LR+L RP  D+LP IY  +G +Y ERVLPSI +E LKAVVAQ++A ++ITQRE VS+     L ERAA F + LDD++IT L FG+EFT A+E KQVA QE
Sbjct:   26 AQTALYNVDGGQRAVIFDRFSGVKNEVVGEGTHFLIPWVQKPIIFDIRSTPRAVTTITGSKDLQNVNITLRILHRPSPDRLPNIYLNIGLDYAERVLPSITNEVLKAVVAQFDAHEMITQREVVSQRASVALRERAAQFGLLLDDIAITHLNFGREFTEAVEMKQVAQQE 195          
The following BLAST results are available for this feature:
BLAST of CX295589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PHB_MOUSE2.785e-5362.28Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1[more]
PHB2_BOVIN3.637e-5361.27Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1[more]
L2CC_DROME6.204e-5359.88Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2... [more]
PHB_HUMAN8.102e-5361.68Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1[more]
PHB_BOVIN8.102e-5361.68Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1[more]
PHB2_CHICK1.382e-5261.27Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1[more]
PHB_CHICK6.859e-5259.88Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1[more]
PHB1_SCHPO3.764e-5058.08Prohibitin-1 OS=Schizosaccharomyces pombe GN=phb1 ... [more]
PHB1_DICDI1.868e-4955.88Prohibitin-1, mitochondrial OS=Dictyostelium disco... [more]
PHB1_CAEEL3.186e-4956.47Mitochondrial prohibitin complex protein 1 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionC05073G10SK DroRLeaf1 Citrus clementina cDNA clone C05073G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295589 ID=CX295589; Name=CX295589; organism=Citrus clementina; type=EST; length=668bp
GCGCGCTTCTCTGCCTCTGACTTGGGTGTAGGGTTTTAGCAGAGCTGTTT
CAGGAAAAAATGAACTTCAACAATGTCAAAGTTCCCAAGATGCCGGGTGG
TGGCGCAGTCTCTGCTCTAATTAAGGTGGGGGTTATTGGTGGGCTTGGTT
TGTACGCTGCTACTCATAGTCTCTACAATGTCGAGGGAGGGCATAGGGCC
ATTATGTTCAACCGCATAGTTGGTGTCAAAGATAAGGTTTATCCCGAGGG
GACGCATCTTATGATTCCATGGTTTGAGAGGCCTGTCATCTATGATGTTC
GTGCACGACCCAACTTAGTGGAGAGTACTACTGGTAGCCATGATCTTCAG
ATGGTTAAGATTGGGCTTAGGGTGCTCACTCGTCCTGTGGCTGACCAGTT
GCCTACAATTTATCGAACCCTTGGTGAGAACTACAATGAAAGGGTTCTGC
CTTCTATCATTCATGAAACTTTAAAAGCTGTGGTTGCTCAGTACAATGCC
AGCCAGCTTATCACACAGCGTGAGACTGTAAGTAGGGAAATTCGGAAGAT
TCTGACTGAGAGGGCAGCCTATTTCAACATTGCTCTGGATGATGTCTCCA
TTACGAGCCTTACTTTTGGCAAGGAATTTACATTTGCCATTGAAGCTAAA
CAGGTGGCCGCACAAGAA
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