CX295592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_PARD8 (10 kDa chaperonin OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +I+PL DRVL+K EEKT GGI +P +A+ KP GE+VAVG G ++ VK G V+Y KYAGTE+E +G +LI+R+ DV+ I+ Sbjct: 2 NIRPLADRVLIKPAAAEEKTLGGIIIPDSAKEKPLKGEIVAVGN----GTKDEEMVVKVGDNVLYGKYAGTEIELDGEKYLIMRQADVLAII 89
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CLOBM (10 kDa chaperonin OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +I+PLGDRV++K EE T GI LP AA+ KPQ EV+AVG G V ++ + +K G +V++SKYAG E++ G I+++DD++ ++E Sbjct: 2 NIRPLGDRVVIKRVEAEETTKSGIVLPGAAKEKPQVAEVIAVGPGGLVDGKEVKMELKVGDKVLFSKYAGNEVKIEGEEVTILKQDDILAVVE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CLOBL (10 kDa chaperonin OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +I+PLGDRV++K EE T GI LP AA+ KPQ EV+AVG G V ++ + +K G +V++SKYAG E++ G I+++DD++ ++E Sbjct: 2 NIRPLGDRVVIKRVEAEETTKSGIVLPGAAKEKPQVAEVIAVGPGGLVDGKEVKMELKVGDKVLFSKYAGNEVKIEGEEVTILKQDDILAVVE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CLOBK (10 kDa chaperonin OS=Clostridium botulinum (strain Okra / Type B1) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +I+PLGDRV++K EE T GI LP AA+ KPQ EV+AVG G V ++ + +K G +V++SKYAG E++ G I+++DD++ ++E Sbjct: 2 NIRPLGDRVVIKRVEAEETTKSGIVLPGAAKEKPQVAEVIAVGPGGLVDGKEVKMELKVGDKVLFSKYAGNEVKIEGEEVTILKQDDILAVVE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CLOBJ (10 kDa chaperonin OS=Clostridium botulinum (strain Kyoto / Type A2) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +I+PLGDRV++K EE T GI LP AA+ KPQ EV+AVG G V ++ + +K G +V++SKYAG E++ G I+++DD++ ++E Sbjct: 2 NIRPLGDRVVIKRVEAEETTKSGIVLPGAAKEKPQVAEVIAVGPGGLVDGKEVKMELKVGDKVLFSKYAGNEVKIEGEEVTILKQDDILAVVE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CLOBH (10 kDa chaperonin OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +I+PLGDRV++K EE T GI LP AA+ KPQ EV+AVG G V ++ + +K G +V++SKYAG E++ G I+++DD++ ++E Sbjct: 2 NIRPLGDRVVIKRVEAEETTKSGIVLPGAAKEKPQVAEVIAVGPGGLVDGKEVKMELKVGDKVLFSKYAGNEVKIEGEEVTILKQDDILAVVE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CLOB6 (10 kDa chaperonin OS=Clostridium botulinum (strain 657 / Type Ba4) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +I+PLGDRV++K EE T GI LP AA+ KPQ EV+AVG G V ++ + +K G +V++SKYAG E++ G I+++DD++ ++E Sbjct: 2 NIRPLGDRVVIKRVEAEETTKSGIVLPGAAKEKPQVAEVIAVGPGGLVDGKEVKMELKVGDKVLFSKYAGNEVKIEGEEVTILKQDDILAVVE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CLOB1 (10 kDa chaperonin OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 63/93 (67.74%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +I+PLGDRV++K EE T GI LP AA+ KPQ EV+AVG G V ++ + +K G +V++SKYAG E++ G I+++DD++ ++E Sbjct: 2 NIRPLGDRVVIKRVEAEETTKSGIVLPGAAKEKPQVAEVIAVGPGGLVDGKEVKMELKVGDKVLFSKYAGNEVKIEGEEVTILKQDDILAVVE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_ACIF5 (10 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 ++PL DRV+++ E+KT GGI +P A+ KP GE+VA G GK + K+ + VK G QV+++KYAGTE++ G L++REDD++ ++E Sbjct: 3 LRPLHDRVVIRRLEEEQKTAGGIIIPDTAKEKPVRGEIVAAGHGKILEDGKVRALDVKTGDQVLFAKYAGTEIKVEGEELLVMREDDIMAVIE 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_ACIF2 (10 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 41/93 (44.09%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 ++PL DRV+++ E+KT GGI +P A+ KP GE+VA G GK + K+ + VK G QV+++KYAGTE++ G L++REDD++ ++E Sbjct: 3 LRPLHDRVVIRRLEEEQKTAGGIIIPDTAKEKPVRGEIVAAGHGKILEDGKVRALDVKTGDQVLFAKYAGTEIKVEGEELLVMREDDIMAVIE 95 The following BLAST results are available for this feature:
BLAST of CX295592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295592 ID=CX295592; Name=CX295592; organism=Citrus clementina; type=EST; length=685bpback to top |