CX295592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_RHOCS (10 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17 Identity = 42/92 (45.65%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 270 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +PL DRV+VK E+KT GGI +P A+ KPQ GE++AVG G KL + VK G +V++ K++GTE++ +G +LI++E D++G+LE Sbjct: 4 RPLHDRVVVKRVESEQKTAGGIIIPDTAKEKPQEGEIIAVGSGARDESGKLIALDVKVGDRVLFGKWSGTEVKIDGVEYLIMKESDIMGVLE 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_GEOSM (10 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17 Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +++PL DR++VK T GG+++P A+ KPQ GEVVAVG GK K+ I +K G +V++ KYAG+E++ G + LI+REDD++G++E Sbjct: 2 NLRPLQDRIIVKRVEEATMTAGGLYIPETAKEKPQQGEVVAVGNGKRGDDGKVYPIDLKVGDKVLFGKYAGSEVKLEGEDFLIMREDDILGVVE 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH101_BRAJA (10 kDa chaperonin 1 OS=Bradyrhizobium japonicum GN=groS1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17 Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 3 Query: 270 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +PL DRVLV+ EEKT GGI +P A+ KPQ GE++A G G + +L I VKPG +V++ K++GTE++ +G ++LI++E D++G+++ Sbjct: 4 RPLHDRVLVRRIDAEEKTAGGIIIPDTAKEKPQEGEIIAAGSGGRNEQGQLIPIDVKPGDRVLFGKWSGTEVKIDGQDYLIMKESDLLGVVD 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_GEOBB (10 kDa chaperonin OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=groS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17 Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +++PL DR++VK T GG+++P A+ KPQ GEVVAVG GK K+ I +K G +V++ KYAG+E++ G + LI+REDD++G++E Sbjct: 2 NLRPLQDRIIVKRVEEATMTAGGLYIPETAKEKPQQGEVVAVGNGKRGEDGKVYPIDLKVGDKVLFGKYAGSEVKLEGEDFLIMREDDILGVVE 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_DESAH (10 kDa chaperonin OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=groS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17 Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 S++PL DR+LV+ EKT GGI +P A+ KP G+VVA G G+ KL + +K G +++SKY GTE++ +G ++LI+R+DDV+G++E Sbjct: 2 SLRPLQDRILVERVQETEKTKGGIIIPDTAKEKPAEGKVVASGNGRVGEDGKLIPMDLKVGDTILFSKYGGTEVKIDGTDYLIMRQDDVLGVIE 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CAUCR (10 kDa chaperonin OS=Caulobacter crescentus GN=groS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17 Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 270 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +PLGDRVLVK E KT GGI +P A+ KPQ GEVVAVG G K + + VK G ++++ K++GTE++ +G + LI++E DV+G++E Sbjct: 4 RPLGDRVLVKRVEEETKTKGGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLGVVE 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CAUCN (10 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groS PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17 Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 270 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +PLGDRVLVK E KT GGI +P A+ KPQ GEVVAVG G K + + VK G ++++ K++GTE++ +G + LI++E DV+G++E Sbjct: 4 RPLGDRVLVKRVEEETKTKGGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLGVVE 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_SYNP6 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.786e-17 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 3 Query: 261 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK VK G +V+YSKYAGT+++ +++++ E D++ ++ Sbjct: 9 STVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_SYNE7 (10 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groS PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 9.786e-17 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 3 Query: 261 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK VK G +V+YSKYAGT+++ +++++ E D++ ++ Sbjct: 9 STVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_PROMS (10 kDa chaperonin OS=Prochlorococcus marinus (strain AS9601) GN=groS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.786e-17 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 261 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G ++++ E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of CX295592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295592 ID=CX295592; Name=CX295592; organism=Citrus clementina; type=EST; length=685bpback to top |