CX295592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_KINRD (10 kDa chaperonin OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13 Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 530 SI PL DR++VK E+ T G+ +P A+ KPQ GEV+AVG G+ ++ + V G +VIYSKY GTE+++ G LI+ DV+ Sbjct: 4 SITPLEDRIVVKPLDAEQTTASGLVIPDTAKEKPQEGEVLAVGPGRVDDNGNRVPVDVAVGDKVIYSKYGGTEVKYGGDELLILSARDVL 93
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_WOLTR (10 kDa chaperonin OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 37/94 (39.36%), Postives = 61/94 (64.89%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEG-KTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 S+ L D VL IK + E+ GGI LPS+A+ KP GEV+A+GEG + ++ ++VK G +V Y ++AGTE+E ++++E D++ I++ Sbjct: 5 SLSVLDDSVL--IKPINEEKQGGIVLPSSAEKKPTKGEVIAIGEGSRNSSGERIALTVKAGDKVFYRQWAGTEIEHGSEKLIVMKESDILAIIK 96
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_RALME (10 kDa chaperonin OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +++PL DRV+VK E KT GI +P A KP GEV+A+G GK K + + VK G +V++ KYAG ++ +G L++RE+D++ ++ Sbjct: 2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQGVKVDGQELLVMREEDIMAVV 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_RALEJ (10 kDa chaperonin OS=Ralstonia eutropha (strain JMP134) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +++PL DRV+VK E KT GI +P A KP GEV+A+G GK K + + VK G +V++ KYAG ++ +G L++RE+D++ ++ Sbjct: 2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQGVKVDGQELLVMREEDIMAVV 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_RALEH (10 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +++PL DRV+VK E KT GI +P A KP GEV+A+G GK K + + VK G +V++ KYAG ++ G L++RE+D++ ++ Sbjct: 2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQAVKVEGQELLVMREEDIMAVV 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_POLSJ (10 kDa chaperonin OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 ++PL DRV+VK E KT GI +P +A KP GEV+AVG GK K L ++VK G +V++ KY+G ++ +G L+++E+D+ ++E Sbjct: 3 LRPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGDLSPMAVKIGDRVLFGKYSGQTVKVDGDELLVMKEEDLFAVVE 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CUPTR (10 kDa chaperonin OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +++PL DRV+VK E KT GI +P A KP GEV+A+G GK K + + VK G +V++ KYAG ++ +G L++RE+D++ ++ Sbjct: 2 NLRPLHDRVIVKRLDNETKTASGIVIPDNAAEKPDQGEVLAIGPGKKDDKGNNIALDVKVGDRVLFGKYAGQGVKVDGQELLVMREEDIMAVV 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_ANASL (10 kDa chaperonin OS=Anabaena sp. (strain L31) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13 Identity = 36/94 (38.30%), Postives = 62/94 (65.96%), Query Frame = 3 Query: 261 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 +++KPLGDRV VK+ + EK ++ P A+ KPQ GEVVA+G GK ++ ++ VK G ++YSKYAGT+++ ++++ E D++ ++ Sbjct: 9 STVKPLGDRVFVKV-SASEKRPRRLYFPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDLLLYSKYAGTDVKLGTEEYVLLSEKDILAMV 101
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_CHLFF (10 kDa chaperonin OS=Chlamydophila felis (strain Fe/C-56) GN=groS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.910e-12 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 539 IKPLGDR+LVK + + + GGI LP A+ K EV+A+G GK + L VK G V+ KYAG EL G ++IV+E +V+ +L Sbjct: 10 IKPLGDRILVKREEEDTTSHGGIILPDTAKKKQDRAEVLALGTGKRDKDGQILPFEVKVGDIVLIDKYAGQELTIEGEEYVIVQESEVMAVL 101
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_OLEAN (10 kDa chaperonin OS=Oleispira antarctica GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12 Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAG-TELEFNGANHLIVREDDVVGILE 542 I+PL DR++V+ K E T GGI LP AA KP G V++VG G+ + + ++V G V++ KY+G ++ +G LI+ E D+ G+LE Sbjct: 3 IRPLHDRIVVRRKEEETATAGGIILPGAAAEKPNQGVVISVGTGRILDNGSVQALAVNEGDVVVFGKYSGQNTIDIDGEELLILNESDIYGVLE 96 The following BLAST results are available for this feature:
BLAST of CX295592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295592 ID=CX295592; Name=CX295592; organism=Citrus clementina; type=EST; length=685bpback to top |