CX295592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_STAAE (10 kDa chaperonin OS=Staphylococcus aureus (strain Newman) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 32/93 (34.41%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + ++ VK G +V++ +YAGTE++ + +L++ E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_STAAC (10 kDa chaperonin OS=Staphylococcus aureus (strain COL) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 32/93 (34.41%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + ++ VK G +V++ +YAGTE++ + +L++ E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_STAAB (10 kDa chaperonin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 32/93 (34.41%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + ++ VK G +V++ +YAGTE++ + +L++ E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_STAA9 (10 kDa chaperonin OS=Staphylococcus aureus (strain JH9) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 32/93 (34.41%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + ++ VK G +V++ +YAGTE++ + +L++ E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_STAA8 (10 kDa chaperonin OS=Staphylococcus aureus (strain NCTC 8325) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 32/93 (34.41%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + ++ VK G +V++ +YAGTE++ + +L++ E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_STAA3 (10 kDa chaperonin OS=Staphylococcus aureus (strain USA300) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 32/93 (34.41%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + ++ VK G +V++ +YAGTE++ + +L++ E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_STAA2 (10 kDa chaperonin OS=Staphylococcus aureus (strain JH1) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 32/93 (34.41%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + ++ VK G +V++ +YAGTE++ + +L++ E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_STAA1 (10 kDa chaperonin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 32/93 (34.41%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + ++ VK G +V++ +YAGTE++ + +L++ E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_VESOH (10 kDa chaperonin OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 35/94 (37.23%), Postives = 60/94 (63.83%), Query Frame = 3 Query: 264 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 +I+PL DRV+V+ ++ T G+ +P +A KP G VVAVG GK + + V G +V++++YAGTE++ +G LI++E D+V +++ Sbjct: 2 NIRPLHDRVVVRRVEEKKTTSSGLIIPDSATEKPSEGVVVAVGNGKKNDNGDTIALDVTIGNKVLFAQYAGTEIKVDGKKLLIMKEGDIVAVIK 95
BLAST of CX295592 vs. ExPASy Swiss-Prot
Match: CH10_THEM4 (10 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 267 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 542 ++PLG R+L+K E++T+GGI LP A+ KP EVVAVG D+ + G +VI+SKY+GTE++ +++I+ +D++ +E Sbjct: 3 VRPLGARLLIKPIQEEKRTEGGIVLPDTAKEKPMKAEVVAVG-----NLEDSDVDIVVGDKVIFSKYSGTEIKIEDDDYIIIDVEDILAKIE 89 The following BLAST results are available for this feature:
BLAST of CX295592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295592 ID=CX295592; Name=CX295592; organism=Citrus clementina; type=EST; length=685bpback to top |