CX295594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.139e-29 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 116 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 589 +KL+ +GD VGKT +I RF D F++TY +TIGIDF +T+ +E + ++LQ+WDTAGQERF+++ +Y R +SF N W+ ++ + V +L+GNK D+ KR+V E+ E +RE + F ETSAK+ N+ F +A Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLA 166
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.139e-29 Identity = 66/158 (41.77%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 116 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 589 +KL+ +GD VGKT ++ RF D F+ T+ +TIGIDF KT+ L+ + ++LQ+WDTAGQERF ++ SY R +SF N SKW+ + DV +L+GNK D+ +KR V +GE +RE + F ETSAK NI+ F +A Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLA 167
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29 Identity = 65/184 (35.33%), Postives = 100/184 (54.35%), Query Frame = 2 Query: 119 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTLA 670 KLV LGD GK+S++ RF+ +F ++TIG F S T+ + + TV+ ++WDTAGQER+ SL P Y R SF KW+ E++ + ++++ L GNK DL ++R+V+ EE + E + F+ETSAK N+ +F +IA LP + + +VD T A Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRAQPAQNPAGMVLVDRAAEGTRA 195
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29 Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 116 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIA 589 +KL+ +GD VGKT + RF D F+ T+ +TIGIDF +T+ L+ + ++LQ+WDTAGQERFR++ +Y R +SF N W+ + DV +++GNK D +KRQVS E+GE + + F+ETSAKA NI+ F +A Sbjct: 9 FKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLA 166
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29 Identity = 59/157 (37.58%), Postives = 95/157 (60.51%), Query Frame = 2 Query: 116 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 586 +KL+ +G+ SVGKTS + R+ D F + +T+GIDF KT+Y D+ ++LQ+WDTAGQER+R++ +Y R ++SF W +++T + ++LVGNK DL ++R VS E+G+ + +L F E SAK N+K +F ++ Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERL 179
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29 Identity = 65/173 (37.57%), Postives = 102/173 (58.96%), Query Frame = 2 Query: 119 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEE 637 KL+ +GD VGK+ ++ RF D+F ++ TIGIDF +T+ + ++ V+LQ+WDTAGQERFR++ +Y R +SF N W V++ V ++LVGNK DL EKR VS E+G+A + + + F+E S+K N++ F +A + +T++ TK E Sbjct: 13 KLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRI--RDTVAKTKGNE 183
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29 Identity = 59/157 (37.58%), Postives = 101/157 (64.33%), Query Frame = 2 Query: 116 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 586 +K+V +GD VGK++I++RF ++F ++TIG++F ++T+ +E +TV+ Q+WDTAGQER+R++ +Y R RQ+F N +W+ E+R R S+++I+L GNK+DL R VS ++ +A ++ + F+ETSA N+ F+ I Sbjct: 13 FKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTI 169
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29 Identity = 61/155 (39.35%), Postives = 99/155 (63.87%), Query Frame = 2 Query: 119 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRK 583 K + +G QSVGK+ ++ RF+ +KF + TIG+DF S+ + ++ + V+LQ+WDTAGQERFRS++ SY R R+S+ + + W+ +V++ DV I+LVGNK DL E+R+V+ E ++E ++F+ETSA G ++ +F K Sbjct: 9 KFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASRIAQENGLLFMETSALTGEGVEEMFLK 163
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29 Identity = 60/157 (38.22%), Postives = 96/157 (61.15%), Query Frame = 2 Query: 116 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKI 586 +KL+ +G+ SVGKTS + R+ D F + + +T+GIDF KT++ D+ V+LQ+WDTAGQER+R++ +Y R +SF + W +++T + +VLVGNK D+ +R VS++ G + +L + F ETSAK N+K +F K+ Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKL 179
BLAST of CX295594 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29 Identity = 67/197 (34.01%), Postives = 115/197 (58.38%), Query Frame = 2 Query: 116 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXXRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAAL---PGMETLSSTKQEEMVDVNLRSTLAMHHSPQSQS 697 +K+V +GD +VGK+++++R+ ++F +ATIG++F +++M +E + V+ Q+WDTAGQERFR++ +Y R R +F + +W+DE++ + V +LVGNK DL R VS+EEG+A + E + F+ETSA N+K F + + + L+S ++ + VN S + +S QS Sbjct: 13 FKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRVSLVKDDNSASKQS 209 The following BLAST results are available for this feature:
BLAST of CX295594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295594 ID=CX295594; Name=CX295594; organism=Citrus clementina; type=EST; length=707bpback to top |