CX295602

Overview
NameCX295602
Unique NameCX295602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295602 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.055e-34
Identity = 84/209 (40.19%), Postives = 120/209 (57.42%), Query Frame = 1
Query:    4 GLRAFWILKLKGVQFDFVDEDLSNKSPLLLQSNPVYKKVPVLIHNGKPISESLVILEYVDETWKQNP--LLPEDPYERARARFWAKFGEDKVLVSIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLADLALGWLANLIGVFE-----EVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPY 609
            G+R    L  K +++++ +EDL NKSPLLLQ NP++KK+PVLIHNGKPI ES++ +EY++E WK     LLP DPY+RA+ARFWA + + K+       +  +G+EQE A    IE LK LE  L  K +FGGE  G  D+A      LIG +      E  G    E E  P   AW +   +   + +S P   K++   + +R+ +
Sbjct:   17 GMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIA------LIGYYSWFYAYETFGNFSTEAE-CPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218          
BLAST of CX295602 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.161e-33
Identity = 81/204 (39.71%), Postives = 118/204 (57.84%), Query Frame = 1
Query:    4 GLRAFWILKLKGVQFDFVDEDLSNKSPLLLQSNPVYKKVPVLIHNGKPISESLVILEYVDETWKQN--PLLPEDPYERARARFWAKFGEDKVLVSIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKIGLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPY 609
            G+R    L  K +++++  EDL NKSPLLLQ NP++KK+PVLIHNGKPI ES++ +EY++E WK     LLP DPY+RA+ARFWA + + K+       +  +G+EQE A    IE LK LE  L  + +FGGE  G  D+AL    +    + E  G    E E  P   AW +   +   + +S P   K++   + +R+ +
Sbjct:   17 GMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAY-ETFGNFSTEAE-CPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218          
BLAST of CX295602 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.774e-25
Identity = 73/203 (35.96%), Postives = 112/203 (55.17%), Query Frame = 1
Query:   34 KGVQFDFVDEDLSNKSPLLLQSNPVYKKVPVLIHNGKPISESLVILEYVDETWKQNP-LLP-------EDPYERARARFWAKFGEDKVLVSIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFF---GGEKIGLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPY 609
            KG++F++ +EDL NKS LLL+SNPV++K+PVL+H G+P+SESLVIL+Y+D+ +   P LLP       +  Y RA ARFWA + + K+       +  +G+ Q  A     E L+ LE EL  + FF   GG ++G  D+AL         +E   G  +  +E  P L+AW +       + +  P  EK+      +++ Y
Sbjct:   28 KGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKY 228          
BLAST of CX295602 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.286e-24
Identity = 71/203 (34.98%), Postives = 110/203 (54.19%), Query Frame = 1
Query:   34 KGVQFDFVDEDLSNKSPLLLQSNPVYKKVPVLIHNGKPISESLVILEYVDETWKQNPLL--------PEDPYERARARFWAKFGEDKVLVSIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFF---GGEKIGLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLVTKFRAIREPY 609
            KG++F++ +EDL NKS LLL+SNPV++K+PVL+H G+P+SESLVIL+Y+D+ +   P L         +  Y RA ARFWA + + K+       +  +G+ Q  A     E L+ LE EL  + FF   GG ++G  D+AL         +E   G  +  +E  P L+AW +       + +  P  EK+      +++ Y
Sbjct:   28 KGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKY 228          
BLAST of CX295602 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24
Identity = 79/221 (35.75%), Postives = 113/221 (51.13%), Query Frame = 1
Query:   10 RAFWILKLKGVQFDFVDEDLS-NKSPLLLQSNPVYKKVPVLI-HNGKPISESLVILEYVDETWKQNP-------LLPEDPYERARARFWAKFGEDKV--------LVSIWNAFIKQGKEQEEAIGLAIETLKFLEEELKGKRFFGGEKI--GLADLALGWLANLIGVFEEVIGVKLIEKERFPLLSAWMQEFAEAPVIKESWPPHEKLV--TKFRAIREPY 609
            RA   L L+GV ++ +DE L   KS  LL +NPVY K+PVL+  +G+ I ES VI++Y+++  +++        LLP+DPYERA  RFW  F +DK         L     A  +  ++   A+ L  E  K   +   G+ FF G     GL DLALG     +   E + G+ LI+    PLL  W Q FA  P  K   P  EK+V  T+F  ++  +
Sbjct:   14 RARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFK---DRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTRFLQVQAQF 231          
BLAST of CX295602 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 60/186 (32.26%), Postives = 94/186 (50.54%), Query Frame = 1
Query:   10 RAFWILKLKGVQFDFVDEDLSNKSPLLLQSNPVYKKVPVLIHN-GKPISESLVILEYVDETWKQNPLLPEDPYERARARFWAKFGEDKVLVSIWNAFIKQGKEQEEAIGLAIETLK---FLEEELKGKR--FFGGEKIGLAD-LALGWLANLIGVFEEVIGVKLIE-KERFPLLSAWMQEFAEAPV 543
            R   +LK KG++ + ++ +L NK     + NP +  VPVL +  G  I+ES++  EY+DE + +  L P+DPYE+A  +    F     + S+  +FI+  K +E+  G+  E  K    LEE +  KR  FFGG  + + D L   W       F+ +  ++L E  +  P L  WM    E PV
Sbjct:   37 RTLMVLKAKGIRHEIININLKNKPEWFFEKNP-FGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKM--TFELFSKVPSLVTSFIR-AKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPW-------FQRLEALELNECIDHTPKLKLWMATMQEDPV 211          
BLAST of CX295602 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 61/183 (33.33%), Postives = 93/183 (50.82%), Query Frame = 1
Query:   22 ILKLKGVQFDFVDEDLSNKSPLLLQSNPVYKKVPVLIHN-GKPISESLVILEYVDETWKQNPLLPEDPYERARARFWAKFGEDKVLVSIWNAFIKQGKEQEEAIGLAIETLK---FLEEELKGKR--FFGGEKIGLAD-LALGWLANLIGVFEEVIGVKLIE-KERFPLLSAWMQEFAEAPVI 546
            +LK KG++ + ++ +L NK     + NP +  VPVL ++ G+ I ES +  EY+DE +    LLP+DPYE+A  +   +      + S+  +FI+  + +E+  GL  E  K    LEE L  K+  FFGG  I + D L   W       FE +  +KL E  +  P L  WM    E P +
Sbjct:   41 VLKAKGIRHEVININLKNKPEWFFKKNP-FGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSK--VPSLVGSFIR-SQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW-------FERLEAMKLNECVDHTPKLKLWMAAMKEDPTV 212          
BLAST of CX295602 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 55/183 (30.05%), Postives = 90/183 (49.18%), Query Frame = 1
Query:   10 RAFWILKLKGVQFDFVDEDLSNKSPLLLQSNPVYKKVPVLIHN-GKPISESLVILEYVDETWKQNPLLPEDPYERARARFWAKFGEDKVLVSIWNAFIKQGKEQEEAIGLAIET-LKFLEEELKG-KRFFGGEKIGLAD-LALGWLANLIGVFEEVIGVKLIE-KERFPLLSAWMQEFAEAPV 543
            R   +LK KG++ + ++ +L NK     + NP+   VPVL ++ G  ++ES++  EY+DE + +  L P+DPY++AR +   +    KV   I +    + KE    +  A+E   K LEE +   K F GG+   + D L   W       F+ +  ++L E     P L  WM    + PV
Sbjct:   37 RTLMVLKAKGIRHEVININLKNKPEWFFEKNPL-GLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLE-SFSKVPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWPW-------FQRLEALELKECLAHTPKLKLWMAAMQQDPV 210          
The following BLAST results are available for this feature:
BLAST of CX295602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTX4_TOBAC3.055e-3440.19Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC1.161e-3339.71Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTU1_ORYSJ5.774e-2535.96Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.286e-2434.98Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE1.680e-2435.75Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTO1_RAT5.070e-1332.26Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_HUMAN1.475e-1233.33Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_MOUSE8.094e-1130.05Glutathione S-transferase omega-1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC05073H11SK DroRLeaf1 Citrus clementina cDNA clone C05073H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295602 ID=CX295602; Name=CX295602; organism=Citrus clementina; type=EST; length=686bp
GAGGGTTTGAGAGCTTTTTGGATATTGAAACTCAAGGGCGTTCAATTTGA
TTTCGTAGATGAAGATCTCTCTAACAAAAGCCCTTTACTTCTTCAATCTA
ATCCTGTCTATAAAAAAGTTCCTGTACTCATACACAACGGGAAACCAATC
TCAGAATCACTAGTAATTCTTGAATATGTTGATGAGACTTGGAAGCAAAA
TCCTTTGCTTCCTGAAGATCCTTACGAAAGAGCCAGGGCTCGCTTCTGGG
CTAAATTTGGTGAAGATAAGGTTTTGGTATCAATATGGAATGCTTTCATT
AAGCAAGGGAAAGAACAAGAGGAAGCTATTGGCCTAGCAATTGAGACTCT
GAAATTCTTAGAAGAAGAGCTGAAGGGAAAGAGATTTTTTGGTGGAGAGA
AGATTGGATTGGCAGATCTTGCATTGGGCTGGCTTGCTAATTTGATCGGC
GTATTTGAAGAGGTAATTGGTGTGAAACTGATAGAAAAGGAGCGGTTTCC
ACTGCTGTCAGCTTGGATGCAAGAGTTTGCTGAGGCCCCTGTAATCAAAG
AAAGCTGGCCACCTCATGAAAAACTAGTCACCAAATTTCGTGCCATCCGA
GAGCCTTATGTTGCAGCTGCTGCCCAGCCTAAATGACAAATTTAGTATGT
GTGGGGGATTTTGAGCCTTGCGCTCTTGTTTCGACT
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