CX295610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_NEIMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria meningitidis serogroup B GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.695e-15 Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 3 Query: 288 PTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 P+PLLD I+ P ++ L K+ L +LA ELR ++ SV +TGGH ++NLG VELT+ALH V++TP+DK+ Sbjct: 3 PSPLLDLIDSPQDLRRLDKKQLPRLAGELRTFLLESVGQTGGHFASNLGAVELTIALHYVYDTPEDKL 70
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_NEIM0 (1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria meningitidis serogroup C (strain 053442) GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.695e-15 Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 3 Query: 288 PTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 P+PLLD I+ P ++ L K+ L +LA ELR ++ SV +TGGH ++NLG VELT+ALH V++TP+DK+ Sbjct: 3 PSPLLDLIDSPQDLRRLDKKQLPRLAGELRTFLLESVGQTGGHFASNLGAVELTIALHYVYDTPEDKL 70
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_DESPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfotalea psychrophila GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.695e-15 Identity = 39/65 (60.00%), Postives = 52/65 (80.00%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 LLD ++ P ++ L+ +DL LAAE+R I+++VSKTGGHL+ +LGVVELTLALH VFNTP DK+ Sbjct: 13 LLDRVDSPKDIRQLTHDDLIILAAEIREKIIDTVSKTGGHLAPSLGVVELTLALHYVFNTPTDKL 77
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS2_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Streptomyces avermitilis GN=dxs2 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.695e-15 Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 294 PLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 PLL I P + LS E L+QLA E+R +V++VSKTGGHL NLGVVELT+ALHRVF++P D++ Sbjct: 2 PLLTRIRGPRDLDRLSLEQLDQLAEEIRTFLVDAVSKTGGHLGPNLGVVELTIALHRVFDSPKDRV 67
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_THETN (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermoanaerobacter tengcongensis GN=dxs PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14 Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 +L+ IN P +K L +DL +L+ E+R IV VSKTGGHL++NLG+VELTLALH VFN+P DKI Sbjct: 1 MLEQINSPYDLKKLDIKDLPRLSEEIRQFIVEKVSKTGGHLASNLGIVELTLALHYVFNSPVDKI 65
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_RHOFD (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=dxs PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14 Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 294 PLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 PLL TIN P ++ + + L LA ELRA +++SV+KTGGHLS+NLG VELT+ALH VFNTP D++ Sbjct: 7 PLLHTINDPADLRLVPRAQLGALADELRAYLLHSVAKTGGHLSSNLGTVELTVALHYVFNTPHDRV 72
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_PSEU5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas stutzeri (strain A1501) GN=dxs PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14 Identity = 35/70 (50.00%), Postives = 52/70 (74.29%), Query Frame = 3 Query: 282 KPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 +P TP+LD P ++ L + +LE+LA ELR +++ SV +TGGH A LGV+ELT+ALH V++TPDD++ Sbjct: 12 RPATPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVYDTPDDRL 81
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_HAHCH (1-deoxy-D-xylulose-5-phosphate synthase OS=Hahella chejuensis (strain KCTC 2396) GN=dxs PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 3 Query: 282 KPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 +P TPLLD I+ P ++ L++ +L QLA ELRA ++ SV ++GGH A LGVVELT+ALH FNTP+D++ Sbjct: 14 RPNTPLLDKIDSPAQLRLLNEAELLQLAHELRAFLLYSVGQSGGHFGAGLGVVELTVALHYAFNTPEDRL 83
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.005e-14 Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 291 TPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 TPLLD + +P ++ L + L QLA ELR + +++VS TGGHL A LGVVELT+ALH +FNTP+D+I Sbjct: 6 TPLLDRVCFPQDLRALPESYLVQLANELRTETIDAVSVTGGHLGAGLGVVELTVALHYIFNTPEDRI 72
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_MARMS (1-deoxy-D-xylulose-5-phosphate synthase OS=Marinomonas sp. (strain MWYL1) GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.313e-14 Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 3 Query: 282 KPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 +P TPLLD +N P ++ KE L L ELR ++ SV +TGGH A LGVVELT+ALH ++NTP+D+I Sbjct: 9 RPDTPLLDEVNSPADLRAFKKEQLPALVRELREFMLYSVGQTGGHFGAGLGVVELTVALHYLYNTPEDRI 78 The following BLAST results are available for this feature:
BLAST of CX295610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295610 ID=CX295610; Name=CX295610; organism=Citrus clementina; type=EST; length=493bpback to top |