CX295610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_TREPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Treponema pallidum GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 LL ++ P +K+LS E + LA E+R +I+ VS GGHL++NLGVVELT+ALHRVF+ P D + Sbjct: 5 LLRSLTGPHDLKSLSPEQVRALAQEVRQEILRVVSANGGHLASNLGVVELTIALHRVFSCPHDVV 69
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_METI4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylacidiphilum infernorum (isolate V4) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11 Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDD 485 LLD I+ P +K L +L +LA E+R +++ +SK GGHL NLGVVELTLALH VF+ P D Sbjct: 4 LLDRIDSPADLKKLQVSELTKLAEEIRQEMITVLSKCGGHLGPNLGVVELTLALHYVFDVPRD 66
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_MACCJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Macrococcus caseolyticus (strain JCSC5402) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 3 Query: 309 INYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 I P +K+LS E+L+ L+ ++R ++ + TGGH+ ANLGVVELT+ALH+VFN+P DK+ Sbjct: 6 IKDPSFLKDLSYEELDGLSQDIRTFLIEKCAVTGGHIGANLGVVELTIALHKVFNSPKDKL 66
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_GEOTN (1-deoxy-D-xylulose-5-phosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11 Identity = 32/64 (50.00%), Postives = 47/64 (73.44%), Query Frame = 3 Query: 300 LDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 L I +P +K +S L+QL+A++R ++ +SKTGGH+ NLGVVELT+ALHR F++P DK+ Sbjct: 3 LTKIEHPRVVKTMSIPQLKQLSADIRRFLIEKLSKTGGHIGPNLGVVELTIALHREFDSPKDKL 66
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_CYTH3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=dxs PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = 3 Query: 288 PTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 P LL TI+ P ++ L + L Q++ ELR IV++VS GGH +A+LGVVELT+ALH VFNTP D++ Sbjct: 4 PGELLRTIHSPEELRKLDETQLIQVSEELRQFIVDNVSVYGGHFAASLGVVELTVALHYVFNTPVDQL 71
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS1_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Streptomyces avermitilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11 Identity = 33/65 (50.77%), Postives = 49/65 (75.38%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 +L+ I P +K LS+ +L +LA E+R +V++V++TGGHL NLGVVEL++ALHR F +P D+I Sbjct: 3 MLENIRGPRDLKALSEAELGELAEEIREFLVHAVARTGGHLGPNLGVVELSVALHRAFESPVDRI 67
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_MANSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=dxs PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.358e-11 Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 294 PLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 PLL IN P ++ L+K+ L Q+ ELR ++ SVS+T GHL++ LG VELT+ALH +F TP D++ Sbjct: 5 PLLSLINSPEDLRLLNKDQLPQVCNELREYLLESVSRTSGHLASGLGTVELTVALHYIFKTPFDQL 70
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_BACSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus subtilis GN=dxs PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.358e-11 Identity = 31/61 (50.82%), Postives = 47/61 (77.05%), Query Frame = 3 Query: 306 TINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDK 488 +I P +KN+S ++LE+L+ E+R ++ S+S +GGH+ NLGVVELT+ALH+ FN+P DK Sbjct: 5 SIQDPSFLKNMSIDELEKLSDEIRQFLITSLSASGGHIGPNLGVVELTVALHKEFNSPKDK 65
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_ANADF (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=dxs PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.358e-11 Identity = 30/65 (46.15%), Postives = 48/65 (73.85%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 LLD+I+ P+ +K L +DL +L E+R +I+ + +K GGHL ++LG VEL +ALH V+++P DK+ Sbjct: 4 LLDSIDSPLDLKRLPVDDLPRLCEEIREEIIQTCAKNGGHLGSSLGAVELNVALHYVYSSPTDKL 68
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_TREDE (1-deoxy-D-xylulose-5-phosphate synthase OS=Treponema denticola GN=dxs PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.774e-11 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 LL I P +K LS +L+ LA E+R +I+ V GGHL++NLGV+ELTLA+HRVF++P D + Sbjct: 6 LLSKIKGPEDIKLLSYNELKDLAVEIRKEILTVVGHNGGHLASNLGVIELTLAIHRVFSSPHDAV 70 The following BLAST results are available for this feature:
BLAST of CX295610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295610 ID=CX295610; Name=CX295610; organism=Citrus clementina; type=EST; length=493bpback to top |