CX295624

Overview
NameCX295624
Unique NameCX295624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: SPOP_BOVIN (Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 3
Query:  102 RGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKS--HTEGPKIYS-IAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLLH 722
            +G  WG+K+F +R  L  E +  L  D L++ C V VV+   +  G    + + +P   +    G L E+ + TD    V G+ F AHK +LAARSPVF A     M++     +++ D+E  VFK ++ FIY    P++++            M+  LLAAAD+Y LERL+++CE  LC ++++   A  L LA+ H   QLK+  ++ ++
Sbjct:  127 QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: SPOP_XENTR (Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27
Identity = 70/212 (33.02%), Postives = 115/212 (54.25%), Query Frame = 3
Query:  102 RGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKS--HTEGPKIYS-IAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLLH 722
            +G  WG+K+F +R  L  E +  L  D L++ C V VV+   +  G    + + +P   +    G L E+ + TD    V G+ F AHK +LAARSPVF A     M++     ++++D+E  VFK ++ FIY     ++++            M+  LLAAAD+Y LERL+++CE  LC ++++   A  L LA+ H   QLK+  ++ ++
Sbjct:  127 QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: SPOPB_XENLA (Speckle-type POZ protein B OS=Xenopus laevis GN=spop-B PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27
Identity = 70/212 (33.02%), Postives = 115/212 (54.25%), Query Frame = 3
Query:  102 RGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKS--HTEGPKIYS-IAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLLH 722
            +G  WG+K+F +R  L  E +  L  D L++ C V VV+   +  G    + + +P   +    G L E+ + TD    V G+ F AHK +LAARSPVF A     M++     ++++D+E  VFK ++ FIY     ++++            M+  LLAAAD+Y LERL+++CE  LC ++++   A  L LA+ H   QLK+  ++ ++
Sbjct:  127 QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLSDELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: SPOPA_XENLA (Speckle-type POZ protein A OS=Xenopus laevis GN=spop-A PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27
Identity = 70/212 (33.02%), Postives = 115/212 (54.25%), Query Frame = 3
Query:  102 RGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKS--HTEGPKIYS-IAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLLH 722
            +G  WG+K+F +R  L  E +  L  D L++ C V VV+   +  G    + + +P   +    G L E+ + TD    V G+ F AHK +LAARSPVF A     M++     ++++D+E  VFK ++ FIY     ++++            M+  LLAAAD+Y LERL+++CE  LC ++++   A  L LA+ H   QLK+  ++ ++
Sbjct:  127 QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIKDVEPDVFKEMMCFIYTGKASNLDK------------MADDLLAAADKYALERLKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: TDPZ2_MOUSE (TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.442e-26
Identity = 73/211 (34.60%), Postives = 117/211 (55.45%), Query Frame = 3
Query:  102 RGSMWGYKRFFKR-TLLEQSDYL-KGDCLSVHCSVGVVKSHTEGP---KIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLL 719
            R   WG+ +F  R +LL   ++L   D L++ C V +V +    P    I +I  P   +    G+L E+   TD +  V G  F AHK++LAARSPVFRA     M+++   C ++++++  VFK ++ FIY          TG +    S  M+  +LAAAD+YGLE L+++CE +LC ++++   A TL +A+ H   QLK+  L+ +
Sbjct:  115 RKQNWGFSKFILRDSLLSHRNWLLPKDKLTLCCKVSIVGAILNMPGQNMIPAIKDPRHMLTDDLGKLWENSLFTDCSLLVAGHEFRAHKVILAARSPVFRAMFEHQMEERLANCFEIQELDFQVFKEMMDFIY----------TGKAPTLHSHSMACDVLAAADKYGLEGLKVICEDSLCRNLSVENAAHTLIVADLHSTEQLKTRALHFI 315          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: TDPZ4_MOUSE (TD and POZ domain-containing protein 4 OS=Mus musculus GN=Tdpoz4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.314e-22
Identity = 67/208 (32.21%), Postives = 113/208 (54.33%), Query Frame = 3
Query:  114 WGYKRFFKR-TLLEQSDYLK-GDCLSVHCSVGVVKSHT----EGPKIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLL 719
            +G+++F  R + L  +  L   D  ++ C V V++       + P+  +I +    +    G+L E+   TD +  V G  F AHK +LAARSPVFRA     M+++ T C+++ D++  VFK ++ FIY   +P +           S  M+  LLAAADRYGL+ L+++CE  LC ++++   A TL +A+ H    +K+  L+ +
Sbjct:  119 FGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRP-AIKVTRCTLEDDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHQMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLH----------SHSMACDLLAAADRYGLKDLKVMCEDALCRNLSVENAAHTLIVADLHSTEHVKTQALDFI 315          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: TDPZ3_MOUSE (TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.314e-22
Identity = 72/206 (34.95%), Postives = 109/206 (52.91%), Query Frame = 3
Query:  117 GYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTEGP---KIYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLL 719
            G+K+F  R LL   Q+ +L  D  ++ C V +V +  + P   +  +I  P   +    G+L ++   TD    V G  F AHK +LAARSPVFRA     MK+     I++ D++  VFK ++ FIY          TG +    S  M+  +L AAD+YGL  L++LCE  LC ++++   A TL LAE +   +LKS  L+ +
Sbjct:  120 GFKKFLLRGLLLSHQNWFLPEDQFTICCKVSIVGTVFDMPGQKRTPAIKDPRHMLTDDLGELWDNSLFTDCCLLVAGHEFKAHKAILAARSPVFRAMFEHEMKESLKNPIEIMDLDLDVFKEMMGFIY----------TGKAPHLHSHSMACDVLPAADKYGLVGLKVLCEDVLCRNLSVKNAAHTLILAELNSTEKLKSQALDFI 315          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: TDPZ1_MOUSE (TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.477e-21
Identity = 70/206 (33.98%), Postives = 104/206 (50.49%), Query Frame = 3
Query:  117 GYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTEGPK---IYSIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLL 719
            G+K+F  R LL   ++  L  D L++ C V ++      P      +I  P   +    G+L E+   TD    V G  F AHK +LAARSPVFRA     MK+     IK+ ++   VFK ++ FIY          TG +    S  M+  +L AAD+YGL  L++LCE  LC ++++     TL LA+ H   +LK+  L+ +
Sbjct:  120 GFKKFLPRDLLLSHRNCLLPEDQLTICCKVTILGRKYNMPSQNITPAIKDPRHLLTDDLGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMKESLKTPIKIHNLNPQVFKEMMGFIY----------TGKAPHLHSHSMACDVLPAADKYGLVSLKVLCEDALCRNLSVKNATHTLILADLHSTEKLKTQALDFI 315          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: BAT43_CAEEL (BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans GN=bath-43 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21
Identity = 65/219 (29.68%), Postives = 109/219 (49.77%), Query Frame = 3
Query:  102 RGSMWGYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKSHTEGPKIYSIA----IPPSNIGQHFGQLLESGKRTDVNFEVNGE------TFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCLNLLH 722
            +G  WG+K+F +R  L  E +  L GD LS+ C V VV          +++    +PP  +      L ++ + +D       +      TF  HK +LAARS VF A     M++ +T    V+D+E  V + LL ++Y      +E+            M+Q L+AAAD+Y L+RL+++CE  LC  +  +  + TL LA+ +   QL++  +N ++
Sbjct:  191 QGKDWGFKKFIRRDFLLDEANGLLPGDRLSIFCEVSVVAETVNVTGQTNVSQLFKVPPCRLADDMYGLFDNKQFSDFTLVCKSDLGSPTQTFHIHKAILAARSRVFSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQ------------MAQSLIAAADKYQLDRLKVMCEQALCYQLTTDNASLTLMLADMYSASQLRAHSINFIN 397          
BLAST of CX295624 vs. ExPASy Swiss-Prot
Match: TDPZ5_MOUSE (TD and POZ domain-containing protein 5 OS=Mus musculus GN=Tdpoz5 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21
Identity = 71/203 (34.98%), Postives = 104/203 (51.23%), Query Frame = 3
Query:  117 GYKRFFKRTLL--EQSDYLKGDCLSVHCSVGVVKS--HTEGPKIY-SIAIPPSNIGQHFGQLLESGKRTDVNFEVNGETFAAHKLVLAARSPVFRAQLYGPMKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMEELTGMSSKWASTLMSQHLLAAADRYGLERLRLLCEANLCEDVAINTVATTLALAEQHHCFQLKSVCL 710
            G+K+F     L      +L  + L++ C V +V S     G  I  +I  P   +    G+L E+   TD    V G  F AHK +LAARSPVFRA     M+++     ++ D++  VFK ++ FIY          TG +    S  M+  +L AAD+YGLE L++LCE  LC ++++   A TL LA+ H   QLK+  L
Sbjct:  120 GFKKFILGDFLISHPRRFLPENKLTLCCKVSIVGSVFGMPGQNITPAIKDPRHLLTDDLGELWENSLFTDCCLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLGNPTEIHDLDPKVFKEMMGFIY----------TGKAPHLQSHSMATDVLTAADKYGLEGLKVLCEDALCRNLSVENAAQTLILADLHKREQLKTQAL 312          
The following BLAST results are available for this feature:
BLAST of CX295624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SPOP_BOVIN1.038e-2733.49Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=... [more]
SPOP_XENTR5.154e-2733.02Speckle-type POZ protein OS=Xenopus tropicalis GN=... [more]
SPOPB_XENLA5.154e-2733.02Speckle-type POZ protein B OS=Xenopus laevis GN=sp... [more]
SPOPA_XENLA5.154e-2733.02Speckle-type POZ protein A OS=Xenopus laevis GN=sp... [more]
TDPZ2_MOUSE7.442e-2634.60TD and POZ domain-containing protein 2 OS=Mus musc... [more]
TDPZ4_MOUSE1.314e-2232.21TD and POZ domain-containing protein 4 OS=Mus musc... [more]
TDPZ3_MOUSE1.314e-2234.95TD and POZ domain-containing protein 3 OS=Mus musc... [more]
TDPZ1_MOUSE2.477e-2133.98TD and POZ domain-containing protein 1 OS=Mus musc... [more]
BAT43_CAEEL3.236e-2129.68BTB and MATH domain-containing protein 43 OS=Caeno... [more]
TDPZ5_MOUSE7.208e-2134.98TD and POZ domain-containing protein 5 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionC05074B09SK DroRLeaf1 Citrus clementina cDNA clone C05074B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295624 ID=CX295624; Name=CX295624; organism=Citrus clementina; type=EST; length=723bp
GAGGCGAGCTCACTTTGTTGGATCAGAGCGGCAAAGAGCGTCACAAGGTT
CATAGCCATTTTGGCAGGACGCTGGAGAGCGGGCCTTACACCCTTAAGTA
TCGCGGTAGCATGTGGGGGTACAAGCGGTTTTTCAAGCGTACTCTTCTGG
AACAATCAGACTACCTCAAGGGTGATTGCCTCTCGGTCCACTGCAGTGTT
GGTGTTGTGAAGTCACACACAGAGGGGCCTAAGATTTACTCCATAGCGAT
ACCGCCTTCTAACATTGGTCAGCACTTTGGCCAACTACTGGAAAGTGGGA
AGAGAACTGATGTAAATTTTGAAGTCAACGGTGAAACATTTGCTGCTCAC
AAATTGGTTCTTGCTGCTCGTTCACCTGTTTTTAGGGCCCAACTTTATGG
TCCGATGAAGGATCAGAACACCCAGTGTATAAAAGTTGAGGACATGGAGG
CCCCAGTTTTTAAGGCTTTACTACATTTCATATATTGGGATAGTCTACCT
GACATGGAAGAGCTTACCGGCATGAGTTCAAAGTGGGCTTCTACTTTGAT
GTCTCAGCATCTGCTCGCAGCAGCTGATAGGTATGGTCTGGAAAGGCTTA
GGCTGCTATGTGAGGCCAACCTCTGTGAGGATGTTGCCATTAACACTGTG
GCAACCACATTAGCCTTGGCAGAGCAGCACCATTGTTTCCAGCTGAAGTC
CGTATGTCTCAATTTGTTGCATG
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