CX295629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.572e-13 Identity = 36/104 (34.62%), Postives = 69/104 (66.35%), Query Frame = 3 Query: 255 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGKWSNG 566 ++D LP A +++I+K+ +PA+ ++A+DA++ + EC EFI+ ++SE+++ C RE ++TI + +L A+ LGF +YIE + ++++ DS K S+G Sbjct: 31 EQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDG 134
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 36/107 (33.64%), Postives = 69/107 (64.49%), Query Frame = 3 Query: 246 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGKWSNG 566 G ++D LP A +++I+K+ +PA+ ++A+DA++ + EC EFI+ ++SE+++ C RE ++TI + +L A+ LGF +YIE + ++++ DS K +G Sbjct: 35 GVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDG 141
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB2_ORYSJ (Nuclear transcription factor Y subunit B-2 OS=Oryza sativa subsp. japonica GN=NFYB2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 37/107 (34.58%), Postives = 68/107 (63.55%), Query Frame = 3 Query: 246 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGKWSNG 566 G ++D LP A +++I+K+ +PA+ ++A+DA++ L EC EFI+ V+SE+++ C +E ++TI E +L A+ LGF EY++ + +++ DS K +G Sbjct: 31 GVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREVIGDSKLSSKAGDG 137
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYBA_ARATH (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana GN=NFYB10 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12 Identity = 40/105 (38.10%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 255 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE--EVY-AAYEQHKLETMDSLKGGKWS 560 ++D LP A +++I+K LP + ++A+DA++ + EC EFI+ V+SE+++ C RE ++TI + +L A+ LGF +YI+ +VY Y + + +T S KGG+ S Sbjct: 29 EQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESS 133
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB_PETMA (Nuclear transcription factor Y subunit beta OS=Petromyzon marinus GN=NFYB PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12 Identity = 36/103 (34.95%), Postives = 66/103 (64.08%), Query Frame = 3 Query: 255 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGKWSN 563 ++D LP A + +I+K +P+ ++A+DA++ + EC EFI+ ++SE++E C +E ++TI E +L A+ LGF Y+E + +Q+ + +S+KG K N Sbjct: 55 EQDIYLPIANVARIMKTSIPSSGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPL----KQYLQKYRESMKGEKGIN 153
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB1_ARATH (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana GN=NFYB1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12 Identity = 36/106 (33.96%), Postives = 69/106 (65.09%), Query Frame = 3 Query: 255 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE--EVY-AAYEQHKLETMDSLKGGKWSN 563 ++D LP A +++I+K+ LP + ++ +DA+D + EC EFI+ ++SE+++ C +E ++T+ + +L A+ LGF +Y+E ++Y A Y + + + S K G SN Sbjct: 21 EQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKSGDGSN 126
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB6_ARATH (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12 Identity = 34/104 (32.69%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 255 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGKWSNG 566 ++D +P A + +I++ +LPA +++ D+++ + EC E+I+ ++ E+NE C RE ++TI E VL A+ LGF +YIE + H+ ++ +G S G Sbjct: 58 EQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPL--TLYLHRYRELEGERGVSCSAG 159
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12 Identity = 29/89 (32.58%), Postives = 62/89 (69.66%), Query Frame = 3 Query: 255 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 521 ++D LP A +++I+K+ LPA+ ++++DA++ + EC EFI+ ++ E+++ C RE ++TI + +L A+ LGF +Y+E + ++++ Sbjct: 21 EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYR 109
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB_RAT (Nuclear transcription factor Y subunit beta OS=Rattus norvegicus GN=Nfyb PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.126e-11 Identity = 36/98 (36.73%), Postives = 60/98 (61.22%), Query Frame = 3 Query: 255 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKG 548 ++D LP A + +I+K +P ++A+DA++ + EC EFI+ ++SE++E C +E ++TI E +L A+ LGF Y+E + Y Q E M KG Sbjct: 54 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPL-KLYLQKFREAMKGEKG 150
BLAST of CX295629 vs. ExPASy Swiss-Prot
Match: NFYB_MOUSE (Nuclear transcription factor Y subunit beta OS=Mus musculus GN=Nfyb PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.126e-11 Identity = 36/98 (36.73%), Postives = 60/98 (61.22%), Query Frame = 3 Query: 255 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKG 548 ++D LP A + +I+K +P ++A+DA++ + EC EFI+ ++SE++E C +E ++TI E +L A+ LGF Y+E + Y Q E M KG Sbjct: 54 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPL-KLYLQKFREAMKGEKG 150 The following BLAST results are available for this feature:
BLAST of CX295629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295629 ID=CX295629; Name=CX295629; organism=Citrus clementina; type=EST; length=752bpback to top |