CX295633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.658e-15 Identity = 57/190 (30.00%), Postives = 87/190 (45.79%), Query Frame = 3 Query: 72 DGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAVXXXXXXXXXXXXXXXXXXIVHFHDLIELSGNISNFPDVSIKQTDTAALLY 641 D I+RS P + +P +L + + F N + K LI+ +GE+ T+SQ++ K + G LGI + D +M+ PNS ++ FLG NP ++ +E+ KQ+ S KLI+T DKVKD+ +HF L+E + S P+V I D AL Y Sbjct: 10 DLIFRSKLPDIYIPK--HLPLHTYCFENISKVGDKSCLINGATGETFTYSQVELLSRKVASGLNKLGIQQGDTIMLLLPNSPEYFFAFLGASYRGAISTMANPFFTSAEVIKQLKASQAKLIITQACYVDKVKDY------AAEKNIQIICIDDAPQDCLHFSKLME--ADESEMPEVVINSDDVVALPY 189
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.064e-14 Identity = 57/190 (30.00%), Postives = 87/190 (45.79%), Query Frame = 3 Query: 72 DGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAVXXXXXXXXXXXXXXXXXXIVHFHDLIELSGNISNFPDVSIKQTDTAALLY 641 D I+RS P + +P +L + + F N + K LI+ +GE+ T+SQ++ K + G LGI + D +M+ PNS ++ FLG NP ++ +E+ KQ+ S KLI+T DKVKD+ +HF L+E + S P+V I D AL Y Sbjct: 10 DLIFRSKLPDIYIPK--HLPLHTYCFENISKVGDKSCLINGATGETFTYSQVELLSRKVASGLNKLGIQQGDTIMLLLPNSPEYFFAFLGASYRGAISTMANPFFTSAEVIKQLKASLAKLIITQACYVDKVKDY------AAEKNIQIICIDDAPQDCLHFSKLME--ADESEMPEVVIDSDDVVALPY 189
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.815e-14 Identity = 52/190 (27.37%), Postives = 89/190 (46.84%), Query Frame = 3 Query: 72 DGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAVXXXXXXXXXXXXXXXXXXIVHFHDLIELSGNISNFPDVSIKQTDTAALLY 641 D I+RS P + +P +L + + F N + + S+P LI+ + + T+++++ T K + G LGI + D +MI PNS +F F+G NP+++ +E+ KQ S+ K+I+T KVKD+ +HF +L + + P+V I+ D AL Y Sbjct: 14 DLIFRSKLPDIYIPK--HLPLHSYCFENISEFSSRPCLINGANDQIYTYAEVELTCRKVAVGLNKLGIQQKDTIMILLPNSPEFVFAFMGASYLGAISTMANPLFTPAEVVKQAKASSAKIIITQSCFVGKVKDY------ASENDVKVICIDSAPEGCLHFSELTQ--SDEHEIPEVKIQPDDVVALPY 193
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.044e-14 Identity = 53/140 (37.86%), Postives = 75/140 (53.57%), Query Frame = 3 Query: 54 KSGYGR-DGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRH-LGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKV 467 +SG+ + + + S R PL LP PNLS F +S + K A IDA +G+ LTFS L V + + H +GI + DVV+I +PNS PV L V N + + E+SKQ+ DSNP L+ T +L K+ Sbjct: 13 RSGFCKSNSTFYSKRQPLSLP--PNLSRDVTTFISSQPHRGKTAFIDAATGQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMSLGAVFTTANTLNTSGEISKQIADSNPTLVFTTRQLAPKL 150
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.537e-13 Identity = 55/198 (27.78%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 48 MEKSGYGRDGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAVXXXXXXXXXXXXXXXXXXIVHFHDLIELSGNISNFPDVSIKQTDTAALLY 641 MEK D I+RS P + +P+ +L + + F N + + S+P LI+ + + T++ ++ K + G GI D +MI PNS +F F+G NP+++ +E+ KQ S+ K+IVT +KVKD+ +HF L + N + P+V I+ D AL Y Sbjct: 1 MEKDTKQVDIIFRSKLPDIYIPN--HLPLHSYCFENISEFSSRPCLINGANKQIYTYADVELNSRKVAAGLHKQGIQPKDTIMILLPNSPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIIVTQACHVNKVKDY------AFENDVKIICIDSAPEGCLHFSVLTQ--ANEHDIPEVEIQPDDVVALPY 188
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CLL2_ORYSJ (4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.621e-13 Identity = 55/190 (28.95%), Postives = 85/190 (44.74%), Query Frame = 3 Query: 75 GIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRH-LGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAVXXXXXXXXXXXXXXXXXXIVHFHDLIELSGNISNFPDVSIKQTDTAALLY 641 G+Y SL PPL LPS+P+LS+V LF + + L+DA + +L+ + + V + G R L I + +V++ PNS FPV FL V NP + +E++ ++ D+ P L++ K+ P V FH L+E V + Q D AA+LY Sbjct: 21 GLYSSLHPPLPLPSDPSLSLVPHLFSHLPLHHHS-LLVDAPTAATLSCADFRRLVSSLAAGLRRRLHIARGSLVLLLLPNSLTFPVAFLAVLATGAVATTMNPSSAPAEIAARLRDTAPSLVLASTHNAAKLPPLAAPLVLVPDTFQQQHDDDQFD---FFFHALLETDPETPVEMGVGVGQDDAAAVLY 206
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.424e-13 Identity = 41/142 (28.87%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 69 RDGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSG-ESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAV 491 ++ ++RS PP+ +P +++ F+ + +Y + AL++A +G S T+ ++ + + R +G+ K VV++ PN +PV LG+ NP +E+ KQV DS KL+V +DKVKD +P + Sbjct: 16 QEHVFRSRFPPVAVPD--GVTVPEFVLDGAEAYADRVALVEAAAGGRSYTYGEVARDTARFARALRSVGVRKGHVVVVALPNLAVYPVVSLGIMSAGAVFSGVNPRALAAEIKKQVEDSEAKLVVANEVAFDKVKDAGVPVI 155
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.424e-13 Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = 3 Query: 54 KSGYGR-DGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRH-LGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKV 467 +SG+ + + + S R PL LP P+L + F+ +S A IDA +G LTFS L V + + H +GI + DVV+I +PNS PV L V N + + E+SKQ+ SNP L+ T +L K+ Sbjct: 13 RSGFCKSNSTFYSKRNPLCLPPNPSLDVTTFI--SSQPQRGTTAFIDASTGHRLTFSDLWRVVDRVADCLYHEVGIRRGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQLAPKL 150
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL3_ARATH (4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.424e-13 Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 3 Query: 78 IYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKD 473 I+RS P + +P+ +L + + F +S KP LI +G+S T+ + + + G LGI K DV+MI NS +F F+G NP Y+ EL KQ+ S KLI+T + DK+K+ Sbjct: 34 IFRSKLPDIDIPN--HLPLHTYCFEKLSSVSDKPCLIVGSTGKSYTYGETHLICRRVASGLYKLGIRKGDVIMILLQNSAEFVFSFMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYVDKLKN 163
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.471e-13 Identity = 58/192 (30.21%), Postives = 88/192 (45.83%), Query Frame = 3 Query: 69 RDGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRH-LGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAVXXXXXXXXXXXXXXXXXXIVHFHDLIELSGNISNFPDVSIKQTDTAALLY 641 + GIY S P L LP +PNL V LF S + ALID+ +G S++ ++L+ V + G H LG+ + DVV + PNS FP+ FL + NP S+ E+ KQV + + L T E +K+ + + F+ +++ S P IKQ D AA++Y Sbjct: 28 KTGIYTSKFPSLHLPVDPNLDAVSALF--SHKHHGDTALIDSLTGFSISHTELQIMVQSMAAGIYHVLGVRQGDVVSLVLPNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIKKQVSECSVGLAFTSTENVEKLSSLGVSVISVSESYDFDSIRIENP----KFYSIMKES--FGFVPKPLIKQDDVAAIMY 211 The following BLAST results are available for this feature:
BLAST of CX295633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295633 ID=CX295633; Name=CX295633; organism=Citrus clementina; type=EST; length=642bpback to top |