CX295633
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CLL3_ORYSJ (4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp. japonica GN=4CLL3 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.961e-13 Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 3 Query: 75 GIYRSLRPPLVLPSEPNLSMVHFLF-RNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHL-GITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQ 410 GIY S+ PP+ LP++P+L++V LF R + P P L+DA + +++ + L+ V + G R G+ K VV++ PNS FPV FL V NP S +E++ Q Sbjct: 33 GIYSSIHPPVALPTDPSLTLVAHLFARLPLADPGAPTLVDAATASAVSRADLRRLVASLAAGLRRRHGVRKGSVVLLLLPNSVAFPVSFLAVLAAGAVATTMNPSSSPAEIAAQ 146
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL3_ORYSJ (Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica GN=4CL3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12 Identity = 39/133 (29.32%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 78 IYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDF 476 ++RS P + + + ++++ + F A ++P LID +GES T+++++S +A+ G R +G+ K DVVM N +F FLG NP Y+ E+ +Q + ++IVT +KV++F Sbjct: 11 VFRSKLPDIEIDN--SMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVESASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEVHRQAEAAGARVIVTEACAVEKVREF 141
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.219e-12 Identity = 47/186 (25.27%), Postives = 84/186 (45.16%), Query Frame = 3 Query: 78 IYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAVXXXXXXXXXXXXXXXXXXIVHFHDLIELSGNISNFPDVSIKQTDTAAL 635 I+RSL P + +P + L++ F+ + Y A ++A +G+++T+ + + + LG+ K V+++ PN ++ + LG+ NP VSE+ KQV S + I+T ++KVK LP + V++ DL+E + + I QTD AL Sbjct: 12 IFRSLYPSVPIPDK--LTLPEFVLQGVEEYTENVAFVEAVTGKAVTYGDVVRDTKRLAKALTSLGLRKGQVMVVVLPNVAEYGIIALGIMSAGGVFSGANPTALVSEIKKQVEASGARGIITDATNYEKVKSLGLPVI---------VLGEEKIEGAVNWKDLLEAGDKCGDTDNEEILQTDLCAL 186
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11 Identity = 46/141 (32.62%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 54 KSGY-GRDGIYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGF--RHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKV 467 +SGY +RS R + LP++P + +V FL S + AL+DA +G +TF++L V A+ + + K V +I +PNS FPV L NP+ + +E++KQV D+ P L T EL K+ Sbjct: 12 RSGYCAATRTFRSRRADVPLPADPEVDVVSFLA--SRRHSGVVALVDAATGRRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAAMSLGAVLTTANPLNTPAEIAKQVADARPVLAFTTRELLPKL 150
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL4_ARATH (4-coumarate--CoA ligase 4 OS=Arabidopsis thaliana GN=4CL4 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.879e-11 Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 3 Query: 51 EKSGYGRDGIYRSLRPPLVLPSEPNLSMVHFLFRNSASY----PSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKV 467 E+ D I+RS P + +P+ +L + ++F+ + S +ID +G LT++ +++ + + + G LGI DVVM+ PNS +F + FL V NP Y+ E++KQ S K+I+T L DK+ Sbjct: 19 EEEEPSHDFIFRSKLPDIFIPN--HLPLTDYVFQRFSGDGDGDSSTTCIIDGATGRILTYADVQTNMRRIAAGIHRLGIRHGDVVMLLLPNSPEFALSFLAVAYLGAVSTTANPFYTQPEIAKQAKASAAKMIITKKCLVDKL 159
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.466e-11 Identity = 50/186 (26.88%), Postives = 81/186 (43.55%), Query Frame = 3 Query: 78 IYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDFNLPAVXXXXXXXXXXXXXXXXXXIVHFHDLIELSGNISNFPDVSIKQTDTAAL 635 +++S P + P +L + + F+N + + +P LI + ++ T++ K + G +LGI K DVVMI NS F FL + NP Y+ E+ KQ S KLI+T DK+++ + + +HF L E N S+ P+V I D A+ Sbjct: 26 VFKSKLPDI--PISNHLPLHSYCFQNLSQFAHRPCLIVGPASKTFTYADTHLISSKIAAGLSNLGILKGDVVMILLQNSADFVFSFLAISMIGAVATTANPFYTAPEIFKQFTVSKAKLIITQAMYVDKLRNHDGAKL---GEDFKVVTVDDPPENCLHFSVLSE--ANESDVPEVEIHPDDAVAM 204
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL5_ORYSJ (Probable 4-coumarate--CoA ligase 5 OS=Oryza sativa subsp. japonica GN=4CL5 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11 Identity = 37/130 (28.46%), Postives = 64/130 (49.23%), Query Frame = 3 Query: 78 IYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKV 467 ++RS P + +P +L + ++F A + LID +GE+L+F + + + + G +G+ VM+ PNS +F V FL NP+++ E++KQV S ++VT P KV Sbjct: 9 VFRSRLPDIAIPD--HLPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALSRRVAAGLSSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANPLHTPPEIAKQVAASGATVVVTEPAFVAKV 136
BLAST of CX295633 vs. ExPASy Swiss-Prot
Match: 4CL4_ORYSJ (Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa subsp. japonica GN=4CL4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11 Identity = 38/133 (28.57%), Postives = 66/133 (49.62%), Query Frame = 3 Query: 78 IYRSLRPPLVLPSEPNLSMVHFLFRNSASYPSKPALIDADSGESLTFSQLKSTVIKASHGFRHLGITKNDVVMIFAPNSTQFPVCFLGVXXXXXXXXXXNPVYSVSELSKQVIDSNPKLIVTVPELWDKVKDF 476 ++RS P + +PS +L++ + F ++P LID +G ++ +++ +A+ G R LG+ K DVVM N +F FLG NP Y+ E+ +Q + ++IVT +KV+ F Sbjct: 18 VFRSKLPDIEIPS--HLTLQAYCFEKLPEVAARPCLIDGQTGAVYSYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQASAAGARVIVTEACAVEKVRGF 148 The following BLAST results are available for this feature:
BLAST of CX295633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295633 ID=CX295633; Name=CX295633; organism=Citrus clementina; type=EST; length=642bpback to top |