CX295636

Overview
NameCX295636
Unique NameCX295636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C06_ARATH (Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.241e-15
Identity = 66/187 (35.29%), Postives = 89/187 (47.59%), Query Frame = 1
Query:    1 RIRPRESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVI-YWDGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            ++ P   +  K+ +  +  +MDKE++         NC C          G+           L+V N GDSRAVL         VAV L+ D KPD P E  RI    GRV    D P V  V         LAM+RA GD  LK Y +IS P++     T  D+ +ILA+DG+WDV+SN+ A  +V
Sbjct:  163 KLFPEMYLPLKRALLKTCQQMDKELK----MHPTINCFCS---------GTTSVTVIKQGKDLVVGNIGDSRAVLATRDQDNALVAVQLTIDLKPDLPSESARIHRCKGRVFALQDEPEVARVWLPNSDSPGLAMARAFGDFCLKDYGLISVPDINYHRLTERDQYIILATDGVWDVLSNKEAVDIV 336          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.241e-15
Identity = 69/178 (38.76%), Postives = 85/178 (47.75%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVI-YWDGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            W++    SF  MDKE++    S     C C      C AV             L + N GDSRA+L         +AV L+ D KPD P E  RI+   GRV    D P V  V         LAM+RA GD  LK Y VIS PE +    T  D+ ++LASDG+WDV+SNE    VV
Sbjct:  158 WEEAFLKSFNAMDKELR----SHPNLECFCS----GCTAV-----TIIKQGSNLYMGNIGDSRAILGSKDSNDSMIAVQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVSRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTDRDQFIVLASDGVWDVLSNEEVVEVV 322          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15
Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG---PRVLGVLAMSRAIGDNYLKPY-VISEPEV-TVTERTAEDECLILASDGLWDVVSNETACSVVRTC 522
            +L++++ GDSRA+LCR G  + L+ DH P+R DE  RI+  GG  + W+    P V G LAM+R++GD  LK   VI+EPE   +    A+D  L+L +DG+  +V+++  C  V  C
Sbjct:  200 ELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQC 316          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PP2C2_SCHPO (Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe GN=ptc2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15
Identity = 53/116 (45.69%), Postives = 64/116 (55.17%), Query Frame = 1
Query:  196 SNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYL---------KPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            +N GDSR VL R G A PLS DHKP+   E  RI AAGG   + D  RV G LA+SRAIGD            K  V + P+V +     +DE LILA DG+WD  S++     VR
Sbjct:  137 ANAGDSRTVLGRKGTAEPLSFDHKPNNDVEKARITAAGG---FIDFGRVNGSLALSRAIGDFEYKKDSSLPPEKQIVTAFPDVVIHNIDPDDEFLILACDGIWDCKSSQQVVEFVR 249          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C72_ARATH (Probable protein phosphatase 2C 72 OS=Arabidopsis thaliana GN=At5g26010 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15
Identity = 61/182 (33.52%), Postives = 91/182 (50.00%), Query Frame = 1
Query:   16 ESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVL---CRNGV--AVPLSNDHKPDRPDELLRIEAAGGRVI----------YWDGPRVLGVLAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            E+ KW++    +F  +D+E+               LQ   C   GS           L+++N GDSRAVL     +G   AV L++D  PD P E  RI    GRV            W   + +  LAMSRA GD  LK + VI+ PE++    T++D+ L+LA+DG+WD++SN+   S++
Sbjct:  116 EASKWEKACFTAFRLIDRELN--------------LQVFNCSFSGSTGVVAITQGDDLVIANLGDSRAVLGTMTEDGEIKAVQLTSDLTPDVPSEAERIRMCKGRVFAMKTEPSSQRVWLPNQNIPGLAMSRAFGDFRLKDHGVIAVPEISQHRITSKDQFLVLATDGVWDMLSNDEVVSLI 283          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPY---------VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            L+V+N GD RAVL R G A+ +S DH+    +E  RIE+ GG   Y D   + G LA++RA+GD +L+           + +EPE+ +   T EDE LI+ SDG+WD  SN+ A    R
Sbjct:  168 LLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGG---YVDDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTR 283          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVI---------SEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQK 537
            L V+N GDSR V+ R+G A+ +S DHKP+  +E  RI  AGGRV   DG RV G L +SRA+GD+  K  V          + P++     T EDE ++LA DG+W+ +S+E     VR   +  K
Sbjct:  406 LYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTL-DG-RVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFVRCRLKDNK 529          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 59/174 (33.91%), Postives = 95/174 (54.60%), Query Frame = 1
Query:   25 KWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIG------DNYLKP---YVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRT 519
            K++  ++ +F KMD+ +     + +++N +    T +  A G            L V+N GDSR+VLCRN     +S DHKPD  +E  RIE AGG V   DG RV G L +SRA+G      D+ L+P    +I+ P+V  TE T +D+ +++  DG+++ ++++     V T
Sbjct:   86 KFEDALKETFLKMDELLMTPEGAKELNNYKAT-DTDESYA-GCTANVALIHKNTLYVANAGDSRSVLCRNNTNFDMSVDHKPDNNEEKSRIERAGGFVS--DG-RVNGNLNLSRALGDLEYKSDSKLRPNEQLIIAFPDVKKTELTPQDKFILMGCDGVFETLNHQELLKHVNT 254          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C64_ORYSJ (Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 67/179 (37.43%), Postives = 87/179 (48.60%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNG------VAVPLSNDHKPDRPDELLRIEAAGGRVI-YWDGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            W++    ++  MDK+++    S    +C C          GS           L ++N GDSRAVL          VAV L+ D KPD P E  RI+   GRV    D P V  V         LAM+RA GD  LK Y VIS PE      T +D+ +ILASDG+WDV+SN+ A  +V
Sbjct:  126 WRKAFARAYKAMDKDLR----SHPSLDCFCS---------GSTAVTVLKLGSDLYMANIGDSRAVLGSREATGGGMVAVQLTVDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAVDIV 291          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C34_ARATH (Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 66/187 (35.29%), Postives = 95/187 (50.80%), Query Frame = 1
Query:   28 WKQTM-QASFGKMDKEVQDWSV--SSKISNCRC-ELQTPQCDAV-----GSXXXXXXXXPGKLIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVI-YWDGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            WK+T+ Q +  + DKE+Q +++   S +  C   +L+      +     G+           + ++N GDSRAVL         VAV L+ D KP+ P E  RI    GRV    D P V  V         LAMSRA GD  +K Y ++S PEVT    +  D+ +ILA+DG+WDV+SN+ A  +V
Sbjct:  123 WKETLSQTTIAEPDKELQRFAIWKYSFLKTCEAVDLELEHHRKIDSFNSGTTALTIVRQGDVIYIANVGDSRAVLATVSDEGSLVAVQLTVDFKPNLPQEEERIIGCNGRVFCLQDEPGVHRVWQPVDESPGLAMSRAFGDYCIKDYGLVSVPEVTQRHISIRDQFIILATDGVWDVISNQEAIDIV 309          
The following BLAST results are available for this feature:
BLAST of CX295636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
P2C06_ARATH2.241e-1535.29Probable protein phosphatase 2C 6 OS=Arabidopsis t... [more]
P2C01_ARATH2.241e-1538.76Probable protein phosphatase 2C 1 OS=Arabidopsis t... [more]
PPM1K_BOVIN3.822e-1540.68Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
PP2C2_SCHPO3.822e-1545.69Protein phosphatase 2C homolog 2 OS=Schizosaccharo... [more]
P2C72_ARATH3.822e-1533.52Probable protein phosphatase 2C 72 OS=Arabidopsis ... [more]
P2C27_ORYSJ3.822e-1541.18Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
Y0417_DROME4.992e-1541.27Probable protein phosphatase CG10417 OS=Drosophila... [more]
PP2C3_PARTE4.992e-1533.91Probable protein phosphatase 2C 3 OS=Paramecium te... [more]
P2C64_ORYSJ4.992e-1537.43Probable protein phosphatase 2C 64 OS=Oryza sativa... [more]
P2C34_ARATH4.992e-1535.29Probable protein phosphatase 2C 34 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05074C09SK DroRLeaf1 Citrus clementina cDNA clone C05074C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295636 ID=CX295636; Name=CX295636; organism=Citrus clementina; type=EST; length=759bp
AGGATTCGGCCGAGGGAATCCGTGAAGTGGAAGCAGACAATGCAGGCGAG
CTTTGGGAAGATGGATAAGGAGGTGCAAGATTGGAGTGTGAGTTCCAAGA
TCTCTAACTGCCGCTGCGAGTTACAGACTCCGCAGTGCGACGCCGTTGGA
TCTACCGCCGTCGTTGCTGTCGTCACTCCTGGAAAGCTTATCGTCTCTAA
CTGCGGCGACTCTCGTGCTGTGCTCTGCCGAAACGGCGTCGCGGTTCCTC
TGTCCAACGATCATAAACCTGATCGCCCGGATGAGTTGCTTAGAATCGAA
GCCGCCGGCGGCCGTGTGATTTACTGGGACGGTCCGAGAGTGCTTGGCGT
TCTCGCGATGTCGAGAGCGATCGGAGACAATTACTTAAAGCCGTATGTGA
TATCGGAGCCGGAGGTGACCGTGACTGAGCGTACGGCGGAGGATGAGTGT
TTGATTCTGGCGAGCGATGGGTTATGGGACGTGGTGTCGAACGAGACGGC
GTGCAGCGTGGTGCGCACGTGTTTCCGAGCTCAGAAGGCGGCGGCTGCAG
CTTCACCACCCGGATCGCCGGGGAGCGAGGTGGCAGTGTCTGGTCAAAGC
TCTGACAAAGCTTGCTTGGACGCATCAATTTTGTTGACCAAGCTGGCCTT
GGCTAGGCGGAGTTCGGATAATGTCAGCGTTGTGGTGGTCGATTTAGGAG
GAATCAAGTCAAAGCAGGGATTAGTAGTAATTAAATGAGTATATATATAT
ATACGCAAT
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