CX295636

Overview
NameCX295636
Unique NameCX295636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PP2C1_PARTE (Protein phosphatase 2C 1 OS=Paramecium tetraurelia GN=GSPATT00029903001 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.897e-14
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAEDECLILASDGLWDVVSNE 495
            L V+N GDSR+VLCRN     +S DHKPD P+E  RIE AGG V   DG RV G L +SRA+GD   K           +I+ P+V  TE T +D+ +++  DG+++ ++++
Sbjct:  138 LYVANAGDSRSVLCRNNTNHDMSVDHKPDNPEEKSRIERAGGFVS--DG-RVNGNLNLSRALGDLEYKRDNKLRSNEQLIIALPDVKKTELTPQDKFILMGCDGVFETLNHQ 246          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C73_ORYSJ (Probable protein phosphatase 2C 73 OS=Oryza sativa subsp. japonica GN=Os11g0109000 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14
Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG----PRV------LGVLAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            WK     +F  +D++++  S      +C C          G+           LI++N GDSRAVLC        ++V L+ D KP+ P E  RI  + GRV   D     PR+         LAM+RA GD  LK + +I  PEV   + +A+D+ L+LA+DG+WDV+SN+    +V
Sbjct:  132 WKNIFVKTFEDVDEDLRQHSGI----DCICS---------GTTAVTVVRQGDHLIIANLGDSRAVLCTRDSKDRPISVQLTTDLKPNLPSEAERILNSKGRVFAMDDEPDVPRMWLPDQDAPGLAMARAFGDFCLKSHGLICTPEVYYRKLSAKDDFLVLATDGIWDVLSNKEVIKIV 296          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14
Identity = 54/125 (43.20%), Postives = 72/125 (57.60%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVIYW-DGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            L+V N GDSRAV+         VAV L+ D KP+ P E  RI    GRV    D P V  V         LAM+RA GD  LK + +IS P+V+  + T +DE ++LA+DG+WDV+SNE   ++V
Sbjct:  229 LVVGNVGDSRAVMGTRDSENTLVAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPEVCRVWLPNCDSPGLAMARAFGDFCLKDFGLISVPDVSFRQLTEKDEFIVLATDGIWDVLSNEDVVAIV 353          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.226e-14
Identity = 53/135 (39.26%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  139 DAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            D  G+         G +   N GDSRAV    G A PLS DHKP    E  RI AAGG V +    RV G LA+SRA+GD   K           V + P+V   + T + E ++LA DG+WDV++N+     VR
Sbjct:  113 DVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGGWVEF---NRVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVR 244          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C50_ARATH (Putative protein phosphatase 2C 50 OS=Arabidopsis thaliana GN=At3g63320 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.415e-14
Identity = 60/175 (34.29%), Postives = 85/175 (48.57%), Query Frame = 1
Query:  118 ELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLC---------------------------------------RNG----VAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG-PRVLGVLAMSRAIGDNYLKPY-VISEPEVTVTE-RTAEDECLILASDGLWDVVSNETAC 504
            E  T + D+ GS         G+L+V++ GDS+A+LC                                       R G    +A  L+ DH PDR DE+LR++AAGG V  W G PRV G LA+SR+IGD   + Y VIS PEV   +   A D  L+++SDG+++ +  + AC
Sbjct:  159 EASTRKLDS-GSTATIALIADGQLLVASIGDSKALLCSERYETPEEAKATLIKLYRERKRNQDSSPSRFSDLKLEHRTGLMRFIAKELTKDHHPDREDEMLRVKAAGGYVTKWAGVPRVNGQLAVSRSIGDLTYRSYGVISAPEVMDWQPLVANDSYLVVSSDGIFEKLEVQDAC 332          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13
Identity = 56/173 (32.37%), Postives = 91/173 (52.60%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIG------DNYLKP---YVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRT 519
            +++ +  +F K+DK +Q+ S   +++  R    T +    G            L V+N GDSR+ L R+G    +S DHKPD   E  RIE AGG V   DG RV G L++SRA+G      DN  KP    + + P+V VT+ +A D+ L++  DG+++   ++   + + +
Sbjct:   87 YEKALTETFFKIDKMLQEPSGLDELNKIRGV--TDEASLAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIERAGGFVS--DG-RVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFETWDHQQILNFINS 254          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.097e-13
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAEDECLILASDGLWDVVSN 492
            L V+N GDSR VLCRN     +S DHKPD P+E  RIE AGG V   DG RV G L +SRA+GD   K           +I+ P+V   E   +D+ L+L  DG+++ +++
Sbjct:  138 LYVANAGDSRTVLCRNNANYDMSVDHKPDNPEEKSRIERAGGFVS--DG-RVNGNLNLSRALGDLEYKRDSKLRVNEQLIIAIPDVKKVELGPQDKFLLLGCDGVFETLNH 245          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 53/125 (42.40%), Postives = 70/125 (56.00%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVIYW-DGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            LI+ N GDSRA+L         +AV L+ D KP+ P E  RI    GR+    + P V  V         LAM+RA GD  LK Y +IS PEV+    T +DE ++LA+DG+WDV+SN    S+V
Sbjct:  273 LIIGNLGDSRAILGTRDKDNQLMAVQLTVDLKPNIPSEAQRIRQRRGRIFALPEEPEVARVWLPKYNSPGLAMARAFGDFCLKDYGLISMPEVSYHRITEKDEFVVLATDGVWDVLSNTEVVSIV 397          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGD------NYLKP---YVISEPEVTVTERTAEDECLILASDGLWDVVSNE 495
            +L+V+N GDSR V+ R G A  LS DHKP+   E  RI  AGG   +    R+ G L ++RAIGD       +L P    V + P++ V E   +D+ L+LA DG+WD +S++
Sbjct:  172 QLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGG---FIHMGRINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQ 281          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C38_ORYSJ (Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVIYW-DGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            L++ N GDSRAVL          AV L+ D KP  P E  RI    GR+    D P V  V         LAM+RA GD  LK Y +IS P+V+    T +DE ++LA+DG+WDV+SN    S+V
Sbjct:  268 LLIGNLGDSRAVLGTRDEYDQFFAVQLTVDLKPTIPSEAARIRERSGRIFSLPDEPDVARVWLPKYNMPGLAMARAFGDFCLKDYGLISMPDVSYHRITEKDEFVVLATDGVWDVLSNSEVVSIV 392          
The following BLAST results are available for this feature:
BLAST of CX295636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
PP2C1_PARTE1.897e-1442.86Protein phosphatase 2C 1 OS=Paramecium tetraurelia... [more]
P2C73_ORYSJ3.236e-1433.71Probable protein phosphatase 2C 73 OS=Oryza sativa... [more]
P2C33_ARATH3.236e-1443.20Probable protein phosphatase 2C 33 OS=Arabidopsis ... [more]
PP2C2_CAEEL4.226e-1439.26Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
P2C50_ARATH9.415e-1434.29Putative protein phosphatase 2C 50 OS=Arabidopsis ... [more]
PP2C6_PARTE1.230e-1332.37Probable protein phosphatase 2C 6 OS=Paramecium te... [more]
PP2C2_PARTE2.097e-1343.24Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
P2C14_ORYSJ2.739e-1342.40Probable protein phosphatase 2C 14 OS=Oryza sativa... [more]
P2C11_ORYSJ2.739e-1340.71Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C38_ORYSJ4.673e-1342.40Probable protein phosphatase 2C 38 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC05074C09SK DroRLeaf1 Citrus clementina cDNA clone C05074C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295636 ID=CX295636; Name=CX295636; organism=Citrus clementina; type=EST; length=759bp
AGGATTCGGCCGAGGGAATCCGTGAAGTGGAAGCAGACAATGCAGGCGAG
CTTTGGGAAGATGGATAAGGAGGTGCAAGATTGGAGTGTGAGTTCCAAGA
TCTCTAACTGCCGCTGCGAGTTACAGACTCCGCAGTGCGACGCCGTTGGA
TCTACCGCCGTCGTTGCTGTCGTCACTCCTGGAAAGCTTATCGTCTCTAA
CTGCGGCGACTCTCGTGCTGTGCTCTGCCGAAACGGCGTCGCGGTTCCTC
TGTCCAACGATCATAAACCTGATCGCCCGGATGAGTTGCTTAGAATCGAA
GCCGCCGGCGGCCGTGTGATTTACTGGGACGGTCCGAGAGTGCTTGGCGT
TCTCGCGATGTCGAGAGCGATCGGAGACAATTACTTAAAGCCGTATGTGA
TATCGGAGCCGGAGGTGACCGTGACTGAGCGTACGGCGGAGGATGAGTGT
TTGATTCTGGCGAGCGATGGGTTATGGGACGTGGTGTCGAACGAGACGGC
GTGCAGCGTGGTGCGCACGTGTTTCCGAGCTCAGAAGGCGGCGGCTGCAG
CTTCACCACCCGGATCGCCGGGGAGCGAGGTGGCAGTGTCTGGTCAAAGC
TCTGACAAAGCTTGCTTGGACGCATCAATTTTGTTGACCAAGCTGGCCTT
GGCTAGGCGGAGTTCGGATAATGTCAGCGTTGTGGTGGTCGATTTAGGAG
GAATCAAGTCAAAGCAGGGATTAGTAGTAATTAAATGAGTATATATATAT
ATACGCAAT
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