CX295654

Overview
NameCX295654
Unique NameCX295654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19
Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHI-ETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVL 399
            ++SDFGL+K    G  +HVS+ V GT GY  PEY  + +LT KSDVYSFGV+LLEL+SG+ A+   K G   +++V WA  ++ +   +  I+D  L  +Y  +  +  A  AL C+ P   +RP +SEVL
Sbjct:  231 KLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGME-QSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVL 360          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 56/135 (41.48%), Postives = 84/135 (62.22%), Query Frame = 1
Query:   13 EVSDFGLSKFA--VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFGLS+    +D  +HVS+ V+G+ GYLDPEY+  QQLTDKSDVYSFGV+L E++  + A+ +        N+ +WA      G +  I+DP++  E    S+ K AE A  C   +G  RP+I +VL +++
Sbjct:  628 KVADFGLSRSGPCID-ETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAV-DPLLVREQVNLAEWAIEWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLE 760          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19
Identity = 52/138 (37.68%), Postives = 87/138 (63.04%), Query Frame = 1
Query:   13 EVSDFGLSKF-AVDGAS----HVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFG+SK  A+DG      HV++IV+GT GY+DPEYY+S +LT+KSDVYS G++ LE+++G   IS+       RNIV+      + G +  +ID S + +Y  + + +  E A+ C   +   RP + E++++++
Sbjct:  770 KVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHG------RNIVREVNEACDAGMMMSVIDRS-MGQYSEECVKRFMELAIRCCQDNPEARPWMLEIVRELE 900          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19
Identity = 48/132 (36.36%), Postives = 78/132 (59.09%), Query Frame = 1
Query:   16 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            V DFGL+K      SHV++ VRGT+G++ PEY  + Q ++K+DV+ FGV++LELI+G + I           I+ W +          ++D  L  E+D   + ++ E AL+C  PH ++RP +S+VLK ++
Sbjct:  442 VGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLE 573          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19
Identity = 48/134 (35.82%), Postives = 82/134 (61.19%), Query Frame = 1
Query:   13 EVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-KLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 408
            +++DFGLS+ F  +  SHVS++V GT GYLDP  + +  L +KSD+YSFGV+LLE+I+G+  I   +      ++  W   +   T D+  +ID  +  ++D+ S+WK+ E AL  V  +   RP++  +++ +
Sbjct:  708 KLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQ--TKRVHVSDWVISILRSTNDVNNVIDSKMAKDFDVNSVWKVVELALSSVSQNVSDRPNMPHIVRGL 839          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19
Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = 1
Query:    1 DSAEEVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            D   +V+DFGL++      SHVS+++ GT GY+ PEY  S + T K DVYSFGVILLEL++G+E    +   +   N+V WA   I  G    +IDP L+      S  ++ + A++C+      RP++ +VLK ++
Sbjct: 1054 DFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.132e-18
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            ++SDFGL+K    G SH+++ V GT GY+ PEY  +  L +KSD+YSFGV+LLE I+G++ +   +  AN  N+V+W K+ + T   + ++DP L       ++ +    +L CV P    RP +S+V + ++
Sbjct:  324 KLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGR-PANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLE 455          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.132e-18
Identity = 51/133 (38.35%), Postives = 82/133 (61.65%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFG SK        ++++V+GT+GYLDPEYY +  L +KSDVYSFGV+L+ELISGQ+A+  E+     +++V +  L  +   +  IID  +L E + + + + A  A+ C    G  RP + EV  +++
Sbjct:  248 KVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFER-PETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELE 379          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.479e-18
Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 408
            +VSDFG S+      +H++++V GTVGY+DPEY+ S Q TDKSDVYSFGV+L+ELI+G+++IS  +   N R +  +  L ++   +  IID  +     +  +   A+ A  C+   G  RPS+ EV  ++
Sbjct:  588 KVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQEN-RTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMREVSMEL 718          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18
Identity = 47/133 (35.34%), Postives = 81/133 (60.90%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            ++SDFGL+K   +  +H+S+ + GT+GY+ PEY +   LTDK+DVYSFGV+ LE++SG ++ +N +       ++ WA +  E G +  ++DP L   +  +   ++   AL+C  P   +RP +S V+  +Q
Sbjct:  808 KISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSG-KSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQ 939          
The following BLAST results are available for this feature:
BLAST of CX295654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
APK2B_ARATH2.980e-1942.75Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5241_ARATH3.892e-1941.48Probable receptor-like protein kinase At5g24010 OS... [more]
Y5374_ARATH5.084e-1937.68Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH6.639e-1936.36Probable LRR receptor-like serine/threonine-protei... [more]
Y1570_ARATH6.639e-1935.82Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH6.639e-1937.96Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y2296_ARATH1.132e-1836.84Probable receptor-like protein kinase At2g42960 OS... [more]
WAKLS_ARATH1.132e-1838.35Putative wall-associated receptor kinase-like 16 O... [more]
WAKLH_ARATH1.479e-1839.39Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
Y5344_ARATH1.932e-1835.34Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05074E03SK DroRLeaf1 Citrus clementina cDNA clone C05074E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295654 ID=CX295654; Name=CX295654; organism=Citrus clementina; type=EST; length=715bp
GATTCGGCCGAGGAGGTTTCGGATTTTGGTCTATCAAAATTTGCAGTGGA
TGGAGCCTCTCATGTGTCAAGCATAGTACGGGGCACTGTAGGATATCTAG
ATCCTGAGTACTACATCTCCCAGCAGTTAACGGACAAGAGTGACGTTTAT
AGTTTTGGTGTCATTCTTCTTGAGTTGATATCTGGTCAGGAAGCTATATC
CAACGAAAAGTTTGGTGCCAATTGCCGTAACATAGTCCAATGGGCAAAGC
TACACATCGAGACTGGTGACATTCAAGGAATCATTGATCCATCTCTACTA
TATGAATACGACATCCAGTCAATGTGGAAGATAGCGGAAAAAGCTTTGAT
GTGTGTTCTGCCTCACGGACATATGAGACCATCAATATCAGAAGTTCTCA
AGGACATCCAAGATGCTATCGTGATTGAAAGGGAAGCTGCAGCAGCCAGA
GATGGTAACTCAGATGATATGTCTAGGAATTCCCTTCATTCTTCTCTCAA
CATGGGTTCCTTTGGTGGTACTGAGAACTTCCTGTCATTAGACGAGTCCA
TTGTTCGACCAAGTGCTCGATAGTTCTAGTTCTTGTACAAGCAAAAAATT
CCCTTTTCTTTTCCCATTCTCTGGTCTTATTCTTTGTTGTAGCTAGAATT
ACATAGCTAAAATCTATCTAAGTTGCCTCATGTAAGTTTAGATCCACCAT
GTCTGCATGTCATGA
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