CX295654

Overview
NameCX295654
Unique NameCX295654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18
Identity = 47/133 (35.34%), Postives = 81/133 (60.90%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            ++SDFGL+K   D  +H+S+ + GT+GY+ PEY +   LTDK+DVYSFGV+ LE++SG ++ +N +       ++ WA +  E G +  ++DP L   +  +   ++   AL+C  P   +RP +S V+  ++
Sbjct:  810 KISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSG-KSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLE 941          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18
Identity = 51/133 (38.35%), Postives = 82/133 (61.65%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFG SK        ++++V+GT+GYLDPEYY +  L +KSDVYSFGV+L+EL+SGQ+A+  E+  A+ +++V +     E   +  IID  +L E +++ + + A  A  C    G  RP + EV   ++
Sbjct:  555 KVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQAS-KHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLE 686          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18
Identity = 49/133 (36.84%), Postives = 80/133 (60.15%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +VSDFG S+      +H++++V GTVGY+DPEY+ S Q TDKSDVYSFGV+L ELI+G++++S  +     R +  +  L ++   +  IID  +     +  +   A+ A  C+   G  RPS+ +V  +++
Sbjct:  574 KVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLR-SQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELE 705          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18
Identity = 48/133 (36.09%), Postives = 85/133 (63.91%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFG S+        ++++V+GT+GYLDPEYY +  L +KSDVYSFGV+L+EL+SG++A+  E+   + +++V +    ++   +  IID  ++ EY+ + + + A  A+ C    G  RPS+ EV  +++
Sbjct:  548 KVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFER-PQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELE 679          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18
Identity = 56/136 (41.18%), Postives = 85/136 (62.50%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGA-SHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAI-SNEKFGANCRNIVQWAKLHI-ETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            ++SDFGL++    G  SHVS+ V GT GY  PEY  +  L+ KSDVYSFGV+LLEL+SG+ AI  N+  G +  N+V WA+ ++     +  ++DP L  +Y +    KIA  AL C+      RP+++E++K ++
Sbjct:  218 KLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEH--NLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTME 351          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 54/131 (41.22%), Postives = 80/131 (61.07%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAK-LHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVL 399
            ++SDFGL+K    G  SHVS+ V GT GY  PEY ++ QLT KSDVYSFGV+ LELI+G++AI +E      +N+V WA+ L  +      + DP L   +  +++++    A MC+      RP I++V+
Sbjct:  228 KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGE-QNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVV 357          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 46/128 (35.94%), Postives = 74/128 (57.81%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEV 396
            +VSDFG S+      +H ++++ GTVGY+DPEYY S   T+KSDVYSFGV+L+ELI+G++ +           +  + +L +    +  IID  +  +  ++ +  +A  AL C+   G  RP + EV
Sbjct:  594 KVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDMREV 721          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 49/133 (36.84%), Postives = 81/133 (60.90%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFG S+        ++++V+GT+GYLDPEYY +  L +KSDVYSFGV+L+EL+SGQ+A+  E+     ++IV +     +   +  IID  ++ E + + + K A  A+ C    G  RP + EV  +++
Sbjct:  550 KVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFER-PQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELE 681          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17
Identity = 50/130 (38.46%), Postives = 83/130 (63.85%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWA-KLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVL 399
            ++SDFGL+K   D  +H+S+ V GT+GYL PEY +   LT+K+DVY+FGV+ LEL+SG+   S+E      + +++WA  LH ++ DI+ I D   L +++++   ++   AL+C      +RP +S V+
Sbjct:  833 QISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPN-SDENLEEEKKYLLEWAWNLHEKSRDIELIDDK--LTDFNMEEAKRMIGIALLCTQTSHALRPPMSRVV 959          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17
Identity = 53/141 (37.59%), Postives = 84/141 (59.57%), Query Frame = 1
Query:   13 EVSDFGLSKFA-----VDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSL---LYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +VSDFGLS+        +  SH+ +  +GT+GYLDPEYY + QLTDKSDVYSFGV+LLE+++ ++AI   +   +  N+V +    ++   +   IDP L     + D+Q++ ++   A  C+      RPS+ EV  +I+
Sbjct:  505 KVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDV-NLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIE 644          
The following BLAST results are available for this feature:
BLAST of CX295654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
Y5343_ARATH1.932e-1835.34Probable LRR receptor-like serine/threonine-protei... [more]
WAK3_ARATH1.932e-1838.35Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
WAKLJ_ARATH2.523e-1836.84Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAK5_ARATH2.523e-1836.09Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
NAK_ARATH2.523e-1841.18Probable serine/threonine-protein kinase NAK OS=Ar... [more]
PBS1_ARATH9.587e-1841.22Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
WAKLL_ARATH1.252e-1735.94Putative wall-associated receptor kinase-like 13 O... [more]
WAK4_ARATH1.252e-1736.84Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y1561_ARATH1.635e-1738.46Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH1.635e-1737.59Wall-associated receptor kinase-like 20 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05074E03SK DroRLeaf1 Citrus clementina cDNA clone C05074E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295654 ID=CX295654; Name=CX295654; organism=Citrus clementina; type=EST; length=715bp
GATTCGGCCGAGGAGGTTTCGGATTTTGGTCTATCAAAATTTGCAGTGGA
TGGAGCCTCTCATGTGTCAAGCATAGTACGGGGCACTGTAGGATATCTAG
ATCCTGAGTACTACATCTCCCAGCAGTTAACGGACAAGAGTGACGTTTAT
AGTTTTGGTGTCATTCTTCTTGAGTTGATATCTGGTCAGGAAGCTATATC
CAACGAAAAGTTTGGTGCCAATTGCCGTAACATAGTCCAATGGGCAAAGC
TACACATCGAGACTGGTGACATTCAAGGAATCATTGATCCATCTCTACTA
TATGAATACGACATCCAGTCAATGTGGAAGATAGCGGAAAAAGCTTTGAT
GTGTGTTCTGCCTCACGGACATATGAGACCATCAATATCAGAAGTTCTCA
AGGACATCCAAGATGCTATCGTGATTGAAAGGGAAGCTGCAGCAGCCAGA
GATGGTAACTCAGATGATATGTCTAGGAATTCCCTTCATTCTTCTCTCAA
CATGGGTTCCTTTGGTGGTACTGAGAACTTCCTGTCATTAGACGAGTCCA
TTGTTCGACCAAGTGCTCGATAGTTCTAGTTCTTGTACAAGCAAAAAATT
CCCTTTTCTTTTCCCATTCTCTGGTCTTATTCTTTGTTGTAGCTAGAATT
ACATAGCTAAAATCTATCTAAGTTGCCTCATGTAAGTTTAGATCCACCAT
GTCTGCATGTCATGA
back to top