CX295654

Overview
NameCX295654
Unique NameCX295654
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 44/134 (32.84%), Postives = 83/134 (61.94%), Query Frame = 1
Query:   16 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI--VQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            V DFGL+K      +HV++ VRGT+G++ PEY  + + ++K+DV+ +G++LLELI+GQ A    +  AN  ++  + W K  ++   ++ ++DP L   Y+ + + ++ + AL+C       RP +SEV++ ++
Sbjct:  445 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARL-ANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLE 577          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 44/135 (32.59%), Postives = 84/135 (62.22%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLY--EYDI----QSMWKIAEKALMCVLPHGHMRPSISEVL 399
            +++DFGL++   D  SH+S+ + GT+GY+ PEY    QLT+  DVYSFGV++LE+++G++  +  K      +++  A  H ++G+++ I DP+L +  +YD     + + ++ +  L+C      +RP +S++L
Sbjct:  465 KIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQN-TKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLL 598          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 41/129 (31.78%), Postives = 75/129 (58.14%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVL 399
            +VSDFGL+K     +S+V++ V GT GY+ PEY  +  L +KSD+YSFG++++E+I+G+  +   +      N+V W K  +     + ++DP +      +++ ++   AL CV P  + RP +  ++
Sbjct:  295 KVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGE-TNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHII 422          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 36/68 (52.94%), Postives = 54/68 (79.41%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFG 216
            +VSDFG S+      +H++++V GT GY+DPEY++S Q TDKSDVYSFGV+L+ELI+G++ +S ++ G
Sbjct:  574 KVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRKRIG 641          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 46/134 (34.33%), Postives = 82/134 (61.19%), Query Frame = 1
Query:   16 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI--VQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            V DFGL+K      SHV++ VRGT+G++ PEY  + + ++K+DV+ +GV+LLELI+GQ+A    +  AN  +I  + W K  ++   ++ ++D  L  +Y    + ++ + AL+C       RP +SEV++ ++
Sbjct:  418 VGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARL-ANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE 550          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 46/134 (34.33%), Postives = 82/134 (61.19%), Query Frame = 1
Query:   16 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNI--VQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            V DFGL+K      SHV++ VRGT+G++ PEY  + + ++K+DV+ +GV+LLELI+GQ+A    +  AN  +I  + W K  ++   ++ ++D  L  +Y    + ++ + AL+C       RP +SEV++ ++
Sbjct:  437 VGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARL-ANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE 569          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16
Identity = 47/135 (34.81%), Postives = 81/135 (60.00%), Query Frame = 1
Query:    1 DSAEEVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKF--GANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVL 399
            D   ++SDFGL++   +  +H+S+ V GT+GY+ PEY +   LT K+DVYSFGV++LE+++G   I+N  F    +   ++++A   +E+G +  ++D  L  E D +    + + AL+C       RP +SEV+
Sbjct:  818 DLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG---ITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVV 949          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15
Identity = 45/133 (33.83%), Postives = 79/133 (59.40%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 411
            +V+DFG S+        + ++V+GT+GYLDPEYY +  L +KSDVYSFGV+L+EL+SGQ+A+  ++   + +++V +     +   +  II   ++ E +++ + + A  A  C    G  RP + EV   ++
Sbjct:  549 KVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKR-PQSSKHLVSYFATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLE 680          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15
Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 1
Query:   16 VSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYE-YDIQSMWKIAEKALMCVLPHGHMRPSISEV 396
            +SDFG++K      +H S+ V GT+GY+DPEY  + ++ +KSD+YSFG++LLEL++G++A+ NE       N+ Q      +   +   +DP +     D+  + K  + AL+C   +   RP++ EV
Sbjct:  789 LSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDNE------ANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEV 910          
BLAST of CX295654 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 44/132 (33.33%), Postives = 79/132 (59.85%), Query Frame = 1
Query:   13 EVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLYEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 408
            +VSDFG+S+      +H+++IV+GT+GY+DPEY  S   T KSDVYSFGV+L+EL++G++ +S  +     R +  +    +    +  I+D  +  E D + +  +A+ A  C+  +   RP++ +V  ++
Sbjct:  530 KVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLR-RQEVRMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDVFIEL 660          
The following BLAST results are available for this feature:
BLAST of CX295654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
SERK1_ARATH4.028e-1632.84Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK2_ARATH4.028e-1632.59Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y1154_ARATH6.871e-1631.78Probable serine/threonine-protein kinase At1g01540... [more]
WAKLF_ARATH6.871e-1652.94Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
SERK5_ARATH6.871e-1634.33Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH6.871e-1634.33Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
RKF1_ARATH8.973e-1634.81Probable LRR receptor-like serine/threonine-protei... [more]
WAK1_ARATH1.172e-1533.83Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
ERL1_ARATH1.172e-1534.38LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLG_ARATH1.999e-1533.33Wall-associated receptor kinase-like 8 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC05074E03SK DroRLeaf1 Citrus clementina cDNA clone C05074E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295654 ID=CX295654; Name=CX295654; organism=Citrus clementina; type=EST; length=715bp
GATTCGGCCGAGGAGGTTTCGGATTTTGGTCTATCAAAATTTGCAGTGGA
TGGAGCCTCTCATGTGTCAAGCATAGTACGGGGCACTGTAGGATATCTAG
ATCCTGAGTACTACATCTCCCAGCAGTTAACGGACAAGAGTGACGTTTAT
AGTTTTGGTGTCATTCTTCTTGAGTTGATATCTGGTCAGGAAGCTATATC
CAACGAAAAGTTTGGTGCCAATTGCCGTAACATAGTCCAATGGGCAAAGC
TACACATCGAGACTGGTGACATTCAAGGAATCATTGATCCATCTCTACTA
TATGAATACGACATCCAGTCAATGTGGAAGATAGCGGAAAAAGCTTTGAT
GTGTGTTCTGCCTCACGGACATATGAGACCATCAATATCAGAAGTTCTCA
AGGACATCCAAGATGCTATCGTGATTGAAAGGGAAGCTGCAGCAGCCAGA
GATGGTAACTCAGATGATATGTCTAGGAATTCCCTTCATTCTTCTCTCAA
CATGGGTTCCTTTGGTGGTACTGAGAACTTCCTGTCATTAGACGAGTCCA
TTGTTCGACCAAGTGCTCGATAGTTCTAGTTCTTGTACAAGCAAAAAATT
CCCTTTTCTTTTCCCATTCTCTGGTCTTATTCTTTGTTGTAGCTAGAATT
ACATAGCTAAAATCTATCTAAGTTGCCTCATGTAAGTTTAGATCCACCAT
GTCTGCATGTCATGA
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