CX295655

Overview
NameCX295655
Unique NameCX295655
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.146e-47
Identity = 93/130 (71.54%), Postives = 109/130 (83.85%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            MAVSAIGFEG+EKRLEISF +P +F DP+G+GLR LTK+QLDEIL PAECTIVSSL+N++VDSYVLSESSLFVY+YKIIIKTCG              AE++SL+VR+VRYTRGSFIFPG Q +PHR+FS
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIPPILKLAESISLDVRAVRYTRGSFIFPGAQSFPHRHFS 130          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.562e-46
Identity = 93/130 (71.54%), Postives = 104/130 (80.00%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            M+VSAIGFEGYEKRLE+SFFEPS+FVD  GKGLR L K+Q+DEIL PAECTIVSSLSNDE+DSYVLSESSLF++ YKIIIKTCG              A  LSL V+SVRYTRGSF+ PG Q +PHRNFS
Sbjct:    1 MSVSAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLPSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFS 130          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45
Identity = 91/130 (70.00%), Postives = 102/130 (78.46%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            +  SAIGFEGYEKRLEISFFE S F DP+GKGLR L K+Q+DEIL PAECTIV SLSN  +DSYVLSESSLFVY YKIIIKTCG              AE+LSL+VR+V+YTRGSFIFPG Q +PHR+FS
Sbjct:    3 LPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILKLAESLSLSVRNVKYTRGSFIFPGAQSFPHRSFS 132          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45
Identity = 87/130 (66.92%), Postives = 105/130 (80.77%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            MA+SAIGFEGYEKRLE++FFEP +F+D +GKGLR L K+Q+DEIL PAECTIVSSLSND++DSYVLSESSLF++ YKI+IKTCG              A  LSL+V++VRYTRGSF+ PG Q +PHRNFS
Sbjct:    1 MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQLDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPGGQPFPHRNFS 130          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44
Identity = 92/130 (70.77%), Postives = 102/130 (78.46%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            ++ SAIGFEGYEKRLEISFFE  IF DPEG+GLR L+K QLD++L PAECTIVSSLSN+EVDSYVLSESSLFVY YKIIIKTCG              A+ LSL V+SV+YTRGSF FP  Q YPHRNFS
Sbjct:    3 LSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGSFNFPEVQPYPHRNFS 132          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.254e-44
Identity = 91/130 (70.00%), Postives = 101/130 (77.69%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            ++ SAIGFEGYE RLEISFFE  IF DPEG+GLR L+K QLD++L PAECTIVSSLSN+EVDSYVLSESSLFVY YKIIIKTCG              A+ LSL V+SV+YTRGSF FP  Q YPHRNFS
Sbjct:    3 LSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGSFNFPEVQPYPHRNFS 132          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 7.254e-44
Identity = 89/130 (68.46%), Postives = 103/130 (79.23%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            MA+SAIGFEGYEKRLE++FFEPSIF D +G GLR LTK+QLDEIL PA CTIVSSLSND++DSYVLSESS FVY YK+IIKTCG              A  LSL+V+SV+YTRGSF+ PG Q +PHR+FS
Sbjct:    1 MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQPFPHRSFS 130          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42
Identity = 87/130 (66.92%), Postives = 100/130 (76.92%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            MA+SAIGFEGYEKRLE+SFFEPS F D +G GLR LT++QLDEIL PA C IVSSLSND +DSYVLSESS FVY YK+IIKTCG              A  LSL+V+SV+YTRGSF+ PG Q +PHR+FS
Sbjct:    1 MALSAIGFEGYEKRLEVSFFEPSFFQDSKGLGLRALTRSQLDEILTPAACEIVSSLSNDHLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQPFPHRSFS 130          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM1_BRAJU (S-adenosylmethionine decarboxylase proenzyme 1 OS=Brassica juncea GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.198e-42
Identity = 85/130 (65.38%), Postives = 101/130 (77.69%), Query Frame = 3
Query:  297 MAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            M++SAIGFEG  +RLE+SFFEPS+F+D  GKGLR L+K+Q+DEIL PAECTIVSSLSNDE+DSYVLSESSLF++ YKIIIKTCG              A  +SL V+SVRYTRGSF+ PG Q +P RN S
Sbjct:    1 MSLSAIGFEGLRERLEVSFFEPSLFLDTHGKGLRALSKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGGVSLEVKSVRYTRGSFLCPGGQPFPQRNLS 130          
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.369e-41
Identity = 87/127 (68.50%), Postives = 96/127 (75.59%), Query Frame = 3
Query:  306 SAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFS 686
            SAIGFEG+EKRLEISFF P   VDP  +GLR LTK QLD+ L PAECTIVSSLSND +DSYVLSESSLFVY YKIIIKTCG              +  LSL V+SVRYTRGSFIFPG Q +PHR+F+
Sbjct:    3 SAIGFEGFEKRLEISFFNPGPSVDPVARGLRSLTKNQLDKFLAPAECTIVSSLSNDLLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILELSGELSLTVQSVRYTRGSFIFPGAQTFPHRSFT 129          
The following BLAST results are available for this feature:
BLAST of CX295655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
DCAM_VICFA3.146e-4771.54S-adenosylmethionine decarboxylase proenzyme OS=Vi... [more]
DCAM2_BRAJU1.562e-4671.54S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_CATRO6.561e-4570.00S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM2_ARATH8.568e-4566.92S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_IPONI1.909e-4470.77S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM_IPOBA7.254e-4470.00S-adenosylmethionine decarboxylase proenzyme OS=Ip... [more]
DCAM1_ARATH7.254e-4468.46S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM3_BRAJU1.787e-4266.92S-adenosylmethionine decarboxylase proenzyme 3 OS=... [more]
DCAM1_BRAJU5.198e-4265.38S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM_HELAN3.369e-4168.50S-adenosylmethionine decarboxylase proenzyme OS=He... [more]

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Properties
Property NameValue
Genbank descriptionC05074E04SK DroRLeaf1 Citrus clementina cDNA clone C05074E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295655 ID=CX295655; Name=CX295655; organism=Citrus clementina; type=EST; length=686bp
GTTAACATTCTTGTTCTTCATTGTCTTCTGCAGTGCGCACGCAAGCCATC
CTGATATTCTCAAAGTCTGCAATCAGATCACATAGCGTGATCCATCAACT
GTTAGTTTCCTGTAGTTAGTTATATTAGGTTTACTCCCCTTTTGTAGATC
AACATCTTCCTCTCTCTTTCTCTCTCTTCGCGATTGTGGTTATTGCTTCT
GCAGTCTCTCTTCTACTGTCATCATCCCTGCTGCTTCTGGTTTCTCTGCA
ATCTTAAAGTTAGATTTCAGCTGCAATGGTTTCTGCTGATACCACCATGG
CAGTCTCTGCAATTGGTTTTGAAGGTTATGAAAAGAGGCTGGAGATATCA
TTTTTTGAACCCAGCATCTTTGTTGATCCTGAAGGAAAGGGCCTTAGGCG
CCTGACCAAGGCCCAGCTGGATGAGATTTTAGGACCAGCTGAATGCACTA
TTGTCTCTTCACTGTCAAATGATGAAGTTGACTCCTATGTCCTATCCGAG
TCTAGCCTCTTTGTTTACTCTTACAAGATCATCATCAAAACTTGTGGGAC
TACAAAGTTGCTTCTTTCAATCCCACCCATCCTGAAACTGGCTGAGACCC
TTTCTCTCAATGTACGATCAGTGAGGTATACACGTGGGAGTTTCATTTTC
CCTGGGAATCAGCTATACCCTCATCGCAACTTTTCT
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