CX295655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM1_MOUSE (S-adenosylmethionine decarboxylase proenzyme 1 OS=Mus musculus GN=Amd1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13 Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 318 FEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHRNF 683 FEG EK LE+ F LR + +++ D +L +C+I+S D+ ++YVLSESS+FV + I+KTCG A S +++S Y+R +F+ P +Q YPHRNF Sbjct: 7 FEGTEKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNF 130
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_ONCVO (S-adenosylmethionine decarboxylase proenzyme OS=Onchocerca volvulus GN=smd-1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 52/137 (37.96%), Postives = 72/137 (52.55%), Query Frame = 3 Query: 288 DTTMAVSAIGFEGYEKRLEISFFEPSIFVDPEGKG---LRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSL--NVRSVRYTRGSFIFPGNQLYPHRNF 683 D + + FEG EK LEI F D G LR + ++L +L A+C I+ S SN+ +DSYVLSESS+F+ ++II+KTCG A+ NV SV Y+R +F+ P Q YPH +F Sbjct: 20 DVSGVIEDYFFEGAEKLLEIWF-------DKNQNGATSLRNIPYSELVSMLDIAQCRILHSKSNECMDSYVLSESSMFISDFRIILKTCGTTRLLHAIERILHIAKIYCNMDNVVSVFYSRKNFMHPEKQPYPHSSF 149
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_HUMAN (S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 318 FEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHRNF 683 FEG EK LE+ F + LR + +++ D +L +C+I+S D+ ++YVLSESS+FV + I+KTCG A S +++S Y+R +F+ P +Q YPHRNF Sbjct: 7 FEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNF 130
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_BOVIN (S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus GN=AMD1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 318 FEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHRNF 683 FEG EK LE+ F + LR + +++ D +L +C+I+S D+ ++YVLSESS+FV + I+KTCG A S +++S Y+R +F+ P +Q YPHRNF Sbjct: 7 FEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNF 130
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 318 FEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLN-VRSVRYTRGSFIFPGNQLYPHRNFS 686 FEG EK LEI F E S D LR ++++ + +L C I+S+ ND +D++VLSESS+FV + I+KTCG AE N V + Y+R +F P Q+ PH+ F+ Sbjct: 9 FEGVEKLLEIWFEESSNGDDD----LRNISRSDWENVLSNVNCQIISTSKNDIIDAFVLSESSMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNVVADLFYSRKNFTRPEAQITPHQGFT 128
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_CAEEL (S-adenosylmethionine decarboxylase proenzyme OS=Caenorhabditis elegans GN=smd-1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12 Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 318 FEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHRNF 683 FEG EK LE+ F + E + LR + + ++D +L A C I+ S N+ +DSYVLSESSLF+ ++I+KTCG A + V+SV Y+R +F+ P Q H+NF Sbjct: 25 FEGAEKLLELWFCSST---QNETRSLRIIPREEIDAMLDIARCKILHSKHNESIDSYVLSESSLFISDNRVILKTCGTTRLLAALPVIMQLAGAYAGLDQVQSVYYSRKNFLRPDLQPSLHKNF 145
BLAST of CX295655 vs. ExPASy Swiss-Prot
Match: DCAM_XENLA (S-adenosylmethionine decarboxylase proenzyme OS=Xenopus laevis GN=amd1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12 Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 3 Query: 318 FEGYEKRLEISFFEPSIFVDPEGKG-LRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHRNF 683 FEG EK LE+ F + +G G LR + + + D++L C I+S D+ ++YVLSESS+FV + I+KTCG A +++ Y+R +F+ P +Q YPHRNF Sbjct: 11 FEGTEKLLELWFSQQDA---SKGSGDLRDIPRFEWDKLLENVHCLIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLQALVPLLELAREYCGFDGIQNFFYSRKNFMKPNHQEYPHRNF 132 The following BLAST results are available for this feature:
BLAST of CX295655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295655 ID=CX295655; Name=CX295655; organism=Citrus clementina; type=EST; length=686bpback to top |