CX295687

Overview
NameCX295687
Unique NameCX295687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14
Identity = 54/166 (32.53%), Postives = 75/166 (45.18%), Query Frame = 3
Query:  147 ELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNAR 644
            EL   SF+RA  AEF ATL +++  +   + +                    +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA+ G  ++ +       R     N L  G S       EI  T   V  +F+  D +RN R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAP-----------GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 62/168 (36.90%), Postives = 82/168 (48.81%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAG-ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYT-RYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSA-TDPKRNARDSHVPVL 665
            +A I EFI T LF++  V    G    TD+               A A      V V  +AG ISGGH+NPAVT GL L   +S+ RA +Y + Q L +   C     F  SY T   G   + LA G S   G+  EII TF L++TV++   DPK+ + D   P+L
Sbjct:   19 KALIVEFITTFLFVFAGV----GSAMATDS-----LVGNTLVGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAAC-----FLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLL 172          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 60/208 (28.85%), Postives = 89/208 (42.79%), Query Frame = 3
Query:   12 NFFFFLILSEDQSVAMAKDIEVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKR 635
            N  + ++   ++  AM KD   GG G  +        P   + AE  T   F+R+ I+E +A+ ++++I      G       +              A A G  +  L  C   ISG HINPAVT  L + R +S +RA MY+ AQC G I G  L+       Y      A   +   +     G E I TF++V   F +TDP +
Sbjct:   14 NIDYHIVTLFERLEAMRKDSHGGGHGVNNRLSSTLQAPKRSMQAEIRTL-EFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSVLLAT--------ALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMK 212          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 58/189 (30.69%), Postives = 89/189 (47.09%), Query Frame = 3
Query:  144 EELTQWSFYRATIAEFIATLLFLYI-----TVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGA------EIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPL 674
            +E T     RA++AEF +T +F++        L  I   S   A              +A A    +F  V  +  +SGGH+NPAV+FG  +  ++S++RAV Y +AQ LG+I    +++              N    G+    G+G       E++ TF L+YTV+ +A DPKR A    V  +APL
Sbjct:   12 DEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLA---------LALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTN----------NMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPL 177          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13
Identity = 50/169 (29.59%), Postives = 76/169 (44.97%), Query Frame = 3
Query:  168 YRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPL 674
            +R  +AE I T        L VIG  S T  +             IA+ FG  +  L      ISG HINPAVT G  +  ++S++++V+Y+  QC+GAI G  ++K       +    G +  +   + G  +  E + TF+LV  V   +DP R       P+   L
Sbjct:   23 WRQLMAELIGTFF------LVVIGVGSCTGGSEWSPSIPQ-----IAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGRTDIKGSAPLAVGL 180          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.100e-12
Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = 3
Query:  147 ELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            EL   SF+RA +AEF+ +LL+      T++G  +                   A AFG     LV     +SGGHINPA+T    LA ++SL RA+ Y++AQ LGA+ G G++     +   R   G + L      G G   E++ T   +  VF++ D + + R    P  A LP
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASL-----RWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPA-AVRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALP 163          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 59/180 (32.78%), Postives = 86/180 (47.78%), Query Frame = 3
Query:  141 AEELTQWSFYRATIAEFIATLLFLYITVLTVIGY-KSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSAT-DPKRNARDSHVPVLAPL 674
            +E+ T     RA I+EF+AT +F++    +++   K   D +             +A A      V V     ISGGH+NPA+TFG  L  ++SL+RA+ Y +AQ LGA+    L++        R  G A  LA G      +  E   TF L+Y  ++   DPKR     HV  +APL
Sbjct:   17 SEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALA------VAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGG--MRPPGFA--LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPL 182          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 47/158 (29.75%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIG---TFVLVYTVFSATDPKR 635
            R  ++EFI+T  F+   V +V+  +     +              A A        VY +  +SGGH+NPAVTF + +A ++S+  A+ Y  +Q + ++  C ++K      +      A E+       TG GA ++     FVLVYTVF+A+DP+R
Sbjct:   23 RCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSS----VYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEM-------TGFGASVLEGVLAFVLVYTVFTASDPRR 169          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 51/155 (32.90%), Postives = 75/155 (48.39%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLG-AEIIGTFVLVYTVFSATDPK 632
            RA  AEF +T LF++I V + I  +  T                +A AFG  +F  V+  A +SGGH+NPAVTF   +   +++  A+ Y  +Q LG+   C ++              A E+     TG G G  E + TF++VYTV  A DP+
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDE--TSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEM-----TGFGAGILEGVLTFMVVYTVHVAGDPR 163          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = 3
Query:  147 ELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSA-TDPKR 635
            E ++  F+R  + E + T LF++I V   +   + T  +              A A G  + V V  TAG  ISGGH+NPAVT  L +   V+L R+ +Y+ AQ L +   C L++       T      + LA+G     G+ AE + TF L++ +++   DP++
Sbjct:   11 EASEPDFFRGVLGELVLTFLFVFIGVGAAMTDGATTKGS-------TAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLAT----PVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK 165          
The following BLAST results are available for this feature:
BLAST of CX295687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
MIP_CAVPO5.833e-1432.53Lens fiber major intrinsic protein OS=Cavia porcel... [more]
TIP41_ARATH7.618e-1436.90Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
BIB_DROME9.949e-1428.85Neurogenic protein big brain OS=Drosophila melanog... [more]
TIPA_PHAVU2.216e-1330.69Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
AQP_HAEIX3.781e-1329.59Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
MIP_CHICK1.100e-1232.20Lens fiber major intrinsic protein OS=Gallus gallu... [more]
TIP31_ORYSJ2.451e-1232.78Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP51_ARATH5.459e-1229.75Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP51_ORYSJ1.216e-1132.90Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP43_MAIZE1.588e-1130.12Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05074H01SK DroRLeaf1 Citrus clementina cDNA clone C05074H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295687 ID=CX295687; Name=CX295687; organism=Citrus clementina; type=EST; length=679bp
CTCCTATTGGGAATTTTTTTTTTTTTTTAATTCTCAGTGAAGACCAATCC
GTAGCAATGGCCAAGGACATTGAGGTTGGTGGGCAAGGCGAGTTCCATGC
TAAGGATTACCATGACCCTCCGCCAGCTCCATTGATCGATGCCGAGGAGC
TCACCCAATGGTCATTTTACAGGGCTACTATAGCTGAGTTCATCGCCACG
CTCTTGTTTTTGTACATTACTGTGCTGACAGTGATTGGTTACAAAAGCCA
GACGGACGCCAACCACGGCGGTGACGGATGTGGTGGTGTTGGCATTCTGG
GCATCGCTTGGGCCTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCACT
GCTGGTATCTCTGGTGGACACATTAACCCGGCGGTGACATTTGGGCTGTT
CTTGGCGCGGAAGGTGTCACTGGTGCGAGCCGTAATGTACATGGTGGCTC
AGTGTTTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAG
TCTTACTACACAAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTA
CAGCACTGGCACTGGATTGGGTGCTGAGATCATTGGTACCTTTGTTCTTG
TCTACACTGTTTTCTCCGCCACCGATCCCAAGAGAAATGCTAGGGACTCC
CATGTTCCTGTCTTGGCACCATTGCCAAT
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