CX295688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18 Identity = 58/163 (35.58%), Postives = 89/163 (54.60%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 S+Y+G++HP VT A+L E FS GP+ C+ I +S SY ++++ A A+ T+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F +V+ D+ SRG+GFV F E A AI +NG L +R++ Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEH--GSRGYGFVHFETHEAANRAIQTMNGMLLNDRKV 168 HSP 2 Score: 89.3521 bits (220), Expect = 2.058e-17 Identity = 57/179 (31.84%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 108 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + +A AI T+NG + + + V + +RE G NV++ + ++ D L FS F +VM D +GRSRGFGFV++ N E+AQ A++++NGK + R I A K Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQK 268 HSP 3 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 46/174 (26.44%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 +VY+ N + + L+E+FS+ G K++ D +GFV+Y + A A+ +NG+ + G+ I V A +R+ N++V +L + D L F + T + A+VM + G S+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 56/163 (34.36%), Postives = 88/163 (53.99%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 S+YVG++HP VT A+L E FS GP+ + LI S+Y +V++ + A A+ T+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F V+ D+ S+G+GFV F E A+ AI +NG L R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKV 168 HSP 2 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 55/179 (30.73%), Postives = 89/179 (49.72%), Query Frame = 3 Query: 108 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF-----NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 P S +++V N+ + N L + S+ G + C ++ + S YGFV + +A AI +NG + G+ + V + +RE G NV++ + ++ D L F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 HSP 3 Score: 70.4774 bits (171), Expect = 9.894e-12 Identity = 46/174 (26.44%), Postives = 82/174 (47.13%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 +VY+ N + + L+++F GP K++ + +GFV + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 58/163 (35.58%), Postives = 89/163 (54.60%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 S+Y+G++HP VT A+L E FS GP+ C+ I +S Y ++++ A A+ T+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F +V+ D+ SRG+GFV F QE A AI +NG L +R++ Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEY--GSRGYGFVHFETQEAANRAIQTMNGMLLNDRKV 168 HSP 2 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 56/179 (31.28%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 108 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI T+NG + + + V + +RE G NV++ + ++ D L FS F +VM D +GRSRGFGFV++ N E+AQ A+ ++NGK + R + A K Sbjct: 91 PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQK 268
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 56/163 (34.36%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 S+YVG++ P V+ A L ++FS G + ++ I K Y +V++ D +A AI LN I G+ ++ W SQR+ + G N+F+ +L P++ + L+ FSVF ++V D+ TG+S+GFG+V F E A AI+ LNG L ++I Sbjct: 36 SLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMW----SQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDE-TGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEI 193 HSP 2 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 48/171 (28.07%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 ++++ N+HP + N L + FS G + K+ + +G+V + + SA+ AI LNG + GQ I V + +RE + NV++ +++ E TD + F +D+ V+ G ++GFGFV+F N EDA + +LN + + N A K Sbjct: 124 NIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGK-TDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQK 293 HSP 3 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 45/165 (27.27%), Postives = 80/165 (48.48%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK---DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------------YASSQREDTSGH--FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 575 +VY+ NI+ + T+ +E+ + G + L + + +GFV++ + A + LN GQP+ VN A Y +++ E + + N+F+ +L + D L F+ + T + A+VM + G+S+GFGFV F E+A AI + N Sbjct: 217 NVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTEN-GKSKGFGFVCFSTPEEATKAITEKN 380
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 S+YVG++HP T A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ D+ S+G+GFV F QE A+ AI +NG L +R++ Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 HSP 2 Score: 88.5817 bits (218), Expect = 3.511e-17 Identity = 55/179 (30.73%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 108 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 HSP 3 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 46/174 (26.44%), Postives = 82/174 (47.13%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 +VY+ N + + L+++F GP K++ + +GFV + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 54/163 (33.13%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 S+YVG++H VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ D+ S+G+GFV F QE A+ AI+ +NG L +R++ Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKV 168 HSP 2 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 51/179 (28.49%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 108 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F + +VM D G+S+GFGFVSF EDAQ A++++NGK + + + A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQK 268 HSP 3 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 46/174 (26.44%), Postives = 81/174 (46.55%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 +VY+ N + + L+E+F GP K++ D +GFV + A A+ +NG+ + G+ + V A +R+ N++V +L + D L F F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18 Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 3 Query: 75 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 Q P + + P+ + S S+YVG + P V+ ALL ++FS G + ++ I Y +V++ D + AI LN I G+P ++ W+ S R+ SG N+++ +L P + + +L FS F +V D+ G SRGFGFV F N+ DA+ AI ++G + ++++ Sbjct: 20 QTAPTTTESETPKVETSGA-SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSG--NIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDEN-GVSRGFGFVHFENESDARDAIEAVDGMLMNDQEV 196 HSP 2 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 53/165 (32.12%), Postives = 80/165 (48.48%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------------YASSQREDTSGH--FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 575 +VYV NI + + +E+F G + L K + +GFV++ D +AA A+ LN GQ + V A Y +++ E + + N+FV +L + D L F+ F T + A+VM D+ TG SRGFGFV F E+A AI + N Sbjct: 220 NVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDE-TGNSRGFGFVCFSTPEEATKAITEKN 383
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: SAP49_SCHPO (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe GN=sap49 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17 Identity = 54/181 (29.83%), Postives = 97/181 (53.59%), Query Frame = 3 Query: 111 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 641 R D + ++Y+GN+ +VT+++L E+ GP+ + ++ + +GF ++ + A LN +FG+PI+VN A + + +T N+FVG+L P V + L+ FS A + + GRS+G+GFVS+ + E A +AI +N ++L N+ I ++A K G+ Sbjct: 4 REDRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVNRA-SQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGE 183
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 55/163 (33.74%), Postives = 87/163 (53.37%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 S+YVG++H VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F +V+ D+ S+G+ FV F QE A AI +NG L +R++ Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKV 168 HSP 2 Score: 81.2629 bits (199), Expect = 5.605e-15 Identity = 54/179 (30.17%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 108 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +A AI +NG + + + V + +RE G NV++ + EV D +L FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268 HSP 3 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 50/174 (28.74%), Postives = 87/174 (50.00%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-DTSGHF--------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 +VY+ N +V + L+E+FS G K+++ +GFV Y A A+ +NG+ I G+ I V A +R+ + F N+++ +L + D L FS F + + A+VM + GRS+GFGFV F + E+A A+ ++NG+ +G++ + Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 53/161 (32.92%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602 S+YVG++ P V+ A L ++FS G + ++ I K Y +V++ D + AI LN I G+ ++ W+ S R+ SG N+F+ +L P++ + L+ FSVF +++ D+ G+S+GFGFV F + A+ AI+ LNG L ++I Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSG--NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEI 196 HSP 2 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKV----NWAYASSQREDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 ++++ N+HP + N L + FS G + K+ + +GFV + + +A AI LNG + GQ I V + SQ E+T H+ N++V +++ E TD F+ F A + D G+ +GFGFV++ EDA A+ LN L ++ A K Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQK 296 HSP 3 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 50/165 (30.30%), Postives = 79/165 (47.88%), Query Frame = 3 Query: 135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR-------------EDTSGH--FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 575 ++YV NI+ + T+ QE+F+ GP+ L K +GFV+Y A A+ LN + G+ + V A ++R E + + N+FV +L V D L F+ + T + A+VM + G+S+GFGFV F E+A AI + N Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTEN-GKSKGFGFVCFSTPEEATKAITEKN 383 The following BLAST results are available for this feature:
BLAST of CX295688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295688 ID=CX295688; Name=CX295688; organism=Citrus clementina; type=EST; length=700bpback to top |