CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.310e-36
Identity = 81/140 (57.86%), Postives = 94/140 (67.14%), Query Frame = 2
Query:  332 NKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +K + D+SIG   G+L GRIVI LY D VP+TAENFR LCTGEKG G        YKG+ FHRVIK FMIQ             SIYG  F DENF+L H   G++SMAN+GPNTNGSQFFI T +T  LD +HVVFG+V
Sbjct:    4 SKCFMDISIG---GELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRV 140          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 149.828 bits (377), Expect = 1.418e-35
Identity = 83/149 (55.70%), Postives = 97/149 (65.10%), Query Frame = 2
Query:  317 QSKVTN----KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            Q+K +N    +V+FDV IG   G+  GRIV+ L+ D VP+TAENFRALCTGEKG G        +KG  FHR+IK FMIQ             SIYG  F+DENF   H   G++SMANAG NTNGSQFFI TV TP LD +HVVFGQV
Sbjct:    7 QAKPSNPSNPRVFFDVDIG---GERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQV 152          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 1.851e-35
Identity = 83/149 (55.70%), Postives = 97/149 (65.10%), Query Frame = 2
Query:  317 QSKVTN----KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            Q+K +N    +V+FDV IG   G+  GRIV+ L+ D VP+TAENFRALCTGEKG G        +KG  FHR+IK FMIQ             SIYG  F+DENF   H   G++SMANAG NTNGSQFFI TV TP LD +HVVFGQV
Sbjct:    7 QAKPSNPSNPRVFFDVDIG---GERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQV 152          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.851e-35
Identity = 79/137 (57.66%), Postives = 91/137 (66.42%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+FD++IG   G+LAGR+   LY D VP+TAENFRALCTGEKG G       YKGS FHRVIK FM Q             SIYG  F+DE F + H  P ++SMANAGPNTNGSQFFI    TP LD +HVVFG+V
Sbjct:    7 VFFDIAIG---GQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEV 140          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PAL4B_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4B OS=Homo sapiens GN=PPIAL4B PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.851e-35
Identity = 75/134 (55.97%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V + V+FD+++    GK  GRI I L+ D + +TAENFRAL TGEKGF YKGS FHR+I  FM Q             SIYG  F DEN    H G G++SMANAGPNTNGSQFFIC  KT WLD +HV FG+V
Sbjct:    2 VNSVVFFDITVD---GKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.418e-35
Identity = 80/139 (57.55%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KV+FD+S     GK  GR+V  LY D VP+TAENFRALCTGEKG          YKGS FHR+IKDFM Q             SIYG  F+DENF+L+H  P ++SMANAG NTNGSQFFI TV TP L+ +HVVFG+V
Sbjct:    9 KVFFDISAD---GKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEV 144          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 78/138 (56.52%), Postives = 91/138 (65.94%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+FD+ IG    +  GRI   L+ D VP+TAENFRALCTGEKG G       +KGS FHRVIK FMIQ             SIYG  F DENF+L H  P ++SMAN+GP TNGSQFFI TV TP LD +HVVFG+V
Sbjct:    8 RVFFDIQIGQ---QQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEV 142          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 75/115 (65.22%), Postives = 80/115 (69.57%), Query Frame = 2
Query:  401 LYGDDVPETAENFRALCTGEKGFG------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            L+ D VP+TAENFRALCTGEKG G      YKGS+FHRVI  FM Q             SIYG  FKDENF   H GPGV+SMANAGP TNGSQFFICT KT WLD +HVVFGQV
Sbjct:    3 LFQDVVPQTAENFRALCTGEKGMGDRKPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQV 117          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.188e-35
Identity = 79/139 (56.83%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  335 KVYFDVSIGNP-VGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +VYFD+ IG+   G++A  +V   + D VP+TAENFRALCTGEKG G       YKGS FHRVIK FMIQ             SIYG  F DENF+L H  P ++SMAN+GP TNGSQFFI TV TP LD +HVVFG+V
Sbjct:    9 RVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEV 147          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.047e-34
Identity = 79/141 (56.03%), Postives = 91/141 (64.54%), Query Frame = 2
Query:  320 SKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGE-----KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            S V   V+FDVSIG   G+  GR+ I L+ D VP+TAENFR  CTGE        GYKGSTFHRVIKDFMIQ             SIY   F DENFKL H  PG++SMAN+GP+TNG QFFI   K  WLD +HVVFG++
Sbjct:    7 SPVNPVVFFDVSIG---GQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKI 144          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CYP40_ARATH8.310e-3657.86Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPID_BOVIN1.418e-3555.7040 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPID_HUMAN1.851e-3555.7040 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_AMAMU1.851e-3557.66Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
PAL4B_HUMAN1.851e-3555.97Peptidylprolyl cis-trans isomerase A-like 4B OS=Ho... [more]
PPID_DEBHA2.418e-3557.55Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPID_EMENI7.035e-3556.52Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
CYPH_ALLCE7.035e-3565.22Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
PPID_ASPFU9.188e-3556.83Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIH_MOUSE2.047e-3456.03Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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