CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.242e-31
Identity = 76/140 (54.29%), Postives = 85/140 (60.71%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG---------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            K +FD+SIG   GK  GRIV  LY D VP+TAENF  LC G  G           YKGS FHRVIKDFM Q             SIY   F+DENF + H  P ++SMANAGPNTNGSQ FI  V TP LD +HVVFG+V
Sbjct:    5 KTFFDISIG---GKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEV 141          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.719e-31
Identity = 73/137 (53.28%), Postives = 89/137 (64.96%), Query Frame = 2
Query:  320 SKVTNKV-YFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            SK TN V +FD+   +   +  GRI + L+ + VP+TAENFRALCTGEKGFG+K S FHRVI DF+ Q             SIYG  F+DENF + H GPG++SMAN G +TN SQFFI   K   LD +HVVFG V
Sbjct:  920 SKETNPVVFFDICADD---EPLGRITMELFSNIVPKTAENFRALCTGEKGFGFKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFV 1053          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.163e-31
Identity = 79/148 (53.38%), Postives = 93/148 (62.84%), Query Frame = 2
Query:  284 LVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            ++  SA VA+  +    K + D+ I    G+ AGRIV+ L GD VP+T +NF  L        YKGSTFHRVI DFMIQ             SIYG  F+DENF L H   GV+SMANAGPNTNGSQFFI TVKT WLD RHVVFG++
Sbjct:    9 VLAVSAAVAE--NAGVQKAFMDIEID---GESAGRIVLELRGDVVPKTVKNFIGLFDK-----YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKH-DRGVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKI 145          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.051e-30
Identity = 76/146 (52.05%), Postives = 85/146 (58.22%), Query Frame = 2
Query:  314 LQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +  K   +V+ DV+I    G LAGRIV+ LY D  P T  NF  LCTG  G G        YKGSTFHRVIK+FMIQ             SIYG  F DE F + H  P VVSMAN GPNTNGSQFFI T   P L+  HVVFG+V
Sbjct:    1 MSKKDRRRVFLDVTID---GNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKV 143          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.342e-30
Identity = 72/137 (52.55%), Postives = 88/137 (64.23%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGE------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRT-FKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+FD+++G   G+  GRI + L+    P TAENFR  CTGE      +  GYK S FHRVIKDFMIQ             +IYG   F+DENF L H  PG++SMAN+GPNTNG QFFI T  TP+L+ +HVVFGQV
Sbjct:   16 VFFDITLG---GESLGRIKMELFTSITPRTAENFRQFCTGESKSPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQV 149          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.059e-30
Identity = 74/137 (54.01%), Postives = 86/137 (62.77%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGE------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRT-FKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+FD+++G   G   GRI + L+ D  P TAENFR  CTGE      K  GYK S FHRVIKDFMIQ             +IYG   F DENF L H   GV+SMAN+GPNTNG QFFI T  TP+L+ +HVVFGQV
Sbjct:   16 VFFDIALG---GVPLGRIKMELFADVTPRTAENFRRFCTGESKNSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQV 149          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.995e-30
Identity = 70/135 (51.85%), Postives = 86/135 (63.70%), Query Frame = 2
Query:  341 YFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKG------FGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            YFD++I N   + AGR+   L+ D VP+TA NF+ LC G+K         Y GS+FHR IK FM+Q             SIYG  F+DENF+L H  P ++SMANAGP TNGSQFFI TV TP LD +HVVFG+V
Sbjct:    7 YFDITIAN---EPAGRLTFELFDDVVPKTANNFKHLCIGDKTNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRV 138          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.995e-30
Identity = 73/140 (52.14%), Postives = 84/140 (60.00%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKG---------FGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            K YFD+SIG   GK AGR+V  +Y D  P+TAENF  LC G+ G           Y+GS FHRVIK FM Q             SIYG  F+DENF   H  P ++SMANAGPNTNGSQ FI    TP LD +HVVFG+V
Sbjct:    6 KTYFDLSIG---GKPAGRVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEV 142          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.814e-30
Identity = 71/137 (51.82%), Postives = 84/137 (61.31%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKG------FGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            + +FD+SI    G+ AGRIV  L+    P T ENFRA CTGE G        Y+GS FHRVIK FMIQ             SIYGRTF DEN  L H  P ++SMAN GP+TNGSQFFI + + P LD +H VFG+V
Sbjct:   10 RAFFDISIN---GEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEV 143          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.162e-29
Identity = 69/131 (52.67%), Postives = 82/131 (62.60%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            K +FD+  G+   +  GRI+  L+ +DVP+T  NFR LCT +  FGYKGS FHR+I  FM Q             SIYG  FKDENF   H     +SMANAGPNTNGSQFFI TV   WLD +HVVFG+V
Sbjct:    4 KAFFDIKAGD---ERLGRIIFELF-NDVPDTTRNFRELCTHKNNFGYKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFS-LSMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKV 129          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPID_YEAST1.242e-3154.29Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
RBP2_BOVIN4.719e-3153.28E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
PPIA_NEOCA6.163e-3153.38Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
CYP1_BRUMA1.051e-3052.05Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPIH_ASPOR2.342e-3052.55Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIH_ASPFU3.059e-3054.01Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPID_CRYNE3.995e-3051.85Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPID_ASHGO3.995e-3052.14Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
CYP8_CAEEL6.814e-3051.82Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]
PPIA_SCHMA1.162e-2952.67Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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