CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27
Identity = 68/137 (49.64%), Postives = 81/137 (59.12%), Query Frame = 2
Query:  341 YFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +FD+ I     +  GRI+  L+ D  P+T +NF  LC+GEKG G        YKGSTFHRV+K+FMIQ             SIYG  FKDENF L H    ++SMAN G +TNGSQFFI T   P LD  HVVFG V
Sbjct:   10 HFDIEINR---EPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLV 143          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.571e-26
Identity = 68/139 (48.92%), Postives = 81/139 (58.27%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAG--RIVIGLYGDDVPETAENFRALCTGE-------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            VY D++ G+      G  RIV+ LY D VP TAENFR LCT         +   ++ S FHRVI  FMIQ             SIYG  F+DE+    H  P ++SMANAG NTNGSQFFI TV TP LD +HVVFG+V
Sbjct:   15 VYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRV 153          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.500e-26
Identity = 70/137 (51.09%), Postives = 85/137 (62.04%), Query Frame = 2
Query:  338 VYFDVSIGN-PVGKLAGRIVIGLYGDDVPETAENFRALCTGE---KGF--GYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRT-FKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+FD+SIG+ PVG    R+ + L+ D VP TAENFR LCTGE    G   GYK   FHRVIKDFM+Q              IYG   F DENF   H G G++SMAN+GPN+NG QFFI      +LD +HVVFG++
Sbjct:   13 VFFDISIGDVPVG----RMKMELFSDIVPRTAENFRQLCTGEYKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRL 145          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPR_CALVI (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Calliphora vicina GN=NINAA PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.500e-26
Identity = 64/142 (45.07%), Postives = 81/142 (57.04%), Query Frame = 2
Query:  305 VADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCT-GEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+ L   VT+K+Y DV       K  GRIV GL+G   P+T  NFR +C  G  G  Y GS FHRVI  F+IQ             SIYG  F+DE   + H+ PG + MAN GP+TNG QF++ TV   WL+ +H VFG+V
Sbjct:   17 VSGLSFTVTSKIYMDVKHQK---KPLGRIVFGLFGKRAPKTVTNFRHICLRGINGTTYVGSEFHRVISRFLIQGGDIVNNDGTGSTSIYGDFFQDEALDVEHLRPGYLGMANRGPDTNGCQFYVTTVAAQWLNGKHTVFGKV 155          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.530e-24
Identity = 62/146 (42.47%), Postives = 80/146 (54.79%), Query Frame = 2
Query:  299 AEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCT-GEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLS--HIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            A  + L   VT+++Y DV       K  GRI  GL+G   P+T  NFR +C  G  G  Y GS FHRV+  F++Q             SIYG  F DE+  L+  H  PG + MAN GP+TNG QF++ TV   WLD +H VFG+V
Sbjct:   16 AVASGLSFTVTSRIYMDVKHNK---KPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKV 158          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23
Identity = 58/140 (41.43%), Postives = 82/140 (58.57%), Query Frame = 2
Query:  332 NKVYFDVSIG-NPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            N V+ D+SI   P+G    R++  LY D  P+T +NF+ LCTG+ GF        Y GS FHRV+++  +Q             SIYG TF+DENF + H   GV+ M N G ++NGSQF+I     P+LD+++V FGQ+
Sbjct:  138 NFVFLDISIDLYPIG----RLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQL 273          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23
Identity = 58/138 (42.03%), Postives = 82/138 (59.42%), Query Frame = 2
Query:  338 VYFDVSI-GNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+ D+ I  +P+G    R++  LY D  P+T +NF+ LCTG+ GF        YK S FHR++++  IQ             SIYG TF+DENF + H   GV+ MAN G ++NGSQF+I    TP+LD++ V FGQ+
Sbjct:  144 VFLDICIDSSPIG----RLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQL 277          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 60/116 (51.72%), Postives = 71/116 (61.21%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I LY D  P T +NF  L   ++G+ Y G +FHR+I DFMIQ             SIYG  F DE N  L H G G++SMANAGPNTNGSQFFI    TPWLD +H +FG+V
Sbjct:   14 GSIHIELYWDHAPRTCKNFYELA--KRGY-YDGVSFHRIIADFMIQGGDPTGTGRGGT-SIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRV 125          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.004e-22
Identity = 57/116 (49.14%), Postives = 71/116 (61.21%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G   + LY +  P+T +NF  L   ++G+ Y  + FHR+IKDFMIQ             SIYG  F+DE    L H G GV+SMANAGPNTNGSQFFI    TPWLD +H +FG+V
Sbjct:   12 GTFTLELYTNHAPKTCKNFATLA--DRGY-YDSTVFHRIIKDFMIQGGDPTGTGRGGS-SIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRV 123          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G+I+I LY +  P+T +NF  L   ++G+ Y G  FHRVI DF+IQ             SIYG  F DE +  L H G G++SMANAGPNTN SQFFI    TPWLD +H +FG+V
Sbjct:   11 GKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRV 122          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
NKTR_HUMAN9.209e-2749.64NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
PPID_USTMA1.571e-2648.92Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPIH_RHIOR3.500e-2651.09Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
CYPR_CALVI3.500e-2645.07Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
CYPR_DROME9.530e-2442.47Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
PPIL6_BOVIN2.123e-2341.43Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL6_HUMAN4.730e-2342.03Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIL1_RHIOR1.376e-2251.72Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]
PPIL1_NEUCR4.004e-2249.14Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_SCHPO2.595e-2149.14Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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