CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 61/121 (50.41%), Postives = 69/121 (57.02%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGE----KGFG-YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G IV+ L+ +  P T  NF  L  G     KG   Y+G TFHRVIKDFMIQ                G  F DE +  L H  PGV+SMANAGP TNGSQFFI  V TPWLD +H VFG+V
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCKGRPFYQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKV 165          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I + LY +  P+  +NF  L   ++G+ Y  + FHR+IKDFMIQ             SIYG+ F+DE  K L H G G++SMAN+G N+NGSQFFI    TPWLD +H +FG+V
Sbjct:   13 GDITLELYYNHAPKACKNFYEL--SKRGY-YDNTIFHRLIKDFMIQGGDPLGNGRGGE-SIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRV 124          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19
Identity = 56/116 (48.28%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I   L+  + P+T ENF   C   +   Y G TFHR+IK FMIQ             SI+G  F+DE +  L H  P  +SMANAG NTNGSQFFI  V TPWLD +H VFG+V
Sbjct:  501 GDIHTKLFPVECPKTVENF---CVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGE-SIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRV 612          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19
Identity = 56/116 (48.28%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I   L+  + P+T ENF   C   +   Y G TFHR+IK FMIQ             SI+G  F+DE +  L H  P  +SMANAG NTNGSQFFI  V TPWLD +H VFG+V
Sbjct:  501 GDIHTKLFPVECPKTVENF---CVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGE-SIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRV 612          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.068e-19
Identity = 56/131 (42.75%), Postives = 75/131 (57.25%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V FD S+G+          + LY    P+T  NF  L   E+G+ Y G  FHR+I +FMIQ             SIYG  F DE + +L  +G G+++MAN+GPNTNGSQFFI    TP+LD +H +FG+V
Sbjct:    9 VTFDTSVGS--------FTVELYTAHAPKTCNNFAKLA--ERGY-YNGVIFHRIIPNFMIQGGDPTGTGRGGT-SIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRV 127          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.686e-18
Identity = 56/116 (48.28%), Postives = 69/116 (59.48%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + I L+ D  P   ENF  LC  E+G+ Y G  FHR I++FMIQ             SI+G+ FKDE N KL H G GVVSMAN+GP+TNGSQFF+       L+ +H VFG V
Sbjct:  353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTGTGKGGE-SIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGV 464          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.581e-18
Identity = 57/121 (47.11%), Postives = 70/121 (57.85%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXX-----SIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I ++ + VP+TAENF ALC    G+ Y  +TFHR I  FMIQ                  SI+G+ F DE    L H   G+VSMAN+GPNTNGSQFFI   K P LD ++ VFG+V
Sbjct:   10 GDIKIEVFCEAVPKTAENFLALCAS--GY-YDNNTFHRNIPGFMIQVHEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKV 127          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.581e-18
Identity = 56/116 (48.28%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I L+ +  P+T ENF ALC       Y G  FHR IK FM+Q             SI+G+ F+DE  + L H   GVVSMAN GPNTNGSQFFI   K P LD ++ VFG+V
Sbjct:   10 GDIKIELFCERTPKTCENFLALCASNY---YNGCVFHRNIKGFMVQTGDPLGTGKGGT-SIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKV 121          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.021e-17
Identity = 55/116 (47.41%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I ++ +  P+T ENF ALC       Y G  FHR IK FM+Q             SI+G+ F+DE  + L H   GVVSMAN GPNTNGSQFFI   K P LD ++ VFG+V
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASNY---YNGCVFHRNIKGFMVQTGDPTGTGRGGS-SIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKV 121          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.021e-17
Identity = 52/117 (44.44%), Postives = 69/117 (58.97%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVW 730
            G I I LY ++ P+  +NF      E G+ Y  + FHR+IK+FMIQ             SI+ + F+DE +  L H  P  VSMAN+GPNTNGSQFFI T  TPWLD +H +F + +
Sbjct:  464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLGDGTGGE-SIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAY 576          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIB_TREPA1.860e-1950.41Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
CYPE_DICDI1.860e-1946.55Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPWD1_PONAB2.429e-1948.28Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_HUMAN2.429e-1948.28Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL1_CRYNE7.068e-1942.75Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPIL2_ARATH2.686e-1848.28Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
PPIL3_RHIOR4.581e-1847.11Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
PPIL3_CHICK4.581e-1848.28Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL3_RAT1.021e-1747.41Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
CYP9_SCHPO1.021e-1744.44Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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