CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.333e-17
Identity = 55/116 (47.41%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I ++ +  P+T ENF ALC       Y G  FHR IK FM+Q             SI+G+ F+DE  + L H   GVVSMAN GPNTNGSQFFI   K P LD ++ VFG+V
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASNY---YNGCIFHRNIKGFMVQTGDPTGTGRGGN-SIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKV 121          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.274e-17
Identity = 56/120 (46.67%), Postives = 69/120 (57.50%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXX----SIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + I ++ + VP+TAENF ALC    G+ Y  S FHR+I  FM+Q                 SIYG TF+DE    L H   G+VSMAN GPNTNGSQFFI   K P LD  + VFG++
Sbjct:   10 GDLKIEIFCESVPKTAENFLALCAS--GY-YNASPFHRMIPSFMVQTGAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANKGPNTNGSQFFILFDKAPHLDGLNTVFGKL 126          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17
Identity = 55/117 (47.01%), Postives = 65/117 (55.56%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +G I + L+ D  P+  ENF    T  K   Y    FHRVIK FMIQ             SI+G  F+DE + +  H  P  VSMANAGPNTNGSQFFI    T WLD +H VFG+V
Sbjct:  485 SGDIHMRLFPDAAPKAVENFT---THAKNGYYDNLIFHRVIKGFMIQTGCPFGDGTGGE-SIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRV 597          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17
Identity = 54/116 (46.55%), Postives = 66/116 (56.90%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I ++ +  P+T ENF ALC       Y G  FHR IK FM+Q             SI+ + F+DE  + L H   GVVSMAN GPNTNGSQFFI   K P LD ++ VFG+V
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASNY---YNGCVFHRNIKGFMVQTGDPTGTGRGGS-SIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKV 121          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAES (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0648 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17
Identity = 60/144 (41.67%), Postives = 69/144 (47.92%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ D  P+T ENF    T  K   Y G TFHRVI DFM+Q             SIYG  F+DE F L      G +SMANAGPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPDIAPKTVENF---VTHSKNGYYDGVTFHRVINDFMVQGGDPTATGMGGE-SIYGSAFEDE-FSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQL 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAEQ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0540 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17
Identity = 60/144 (41.67%), Postives = 69/144 (47.92%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ D  P+T ENF    T  K   Y G TFHRVI DFM+Q             SIYG  F+DE F L      G +SMANAGPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPDIAPKTVENF---VTHSKNGYYDGVTFHRVINDFMVQGGDPTATGMGGE-SIYGSAFEDE-FSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQL 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + + L+ D  P+T ENF  LC  +    Y G+ FHR I++F+IQ             S +G+ FKDE    LSH G GV+SMAN+GPNTN SQFFI      +LD++H +FG+V
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLCKKQY---YDGTIFHRSIRNFVIQGGDPTGTGTGGE-SFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRV 400          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAHJ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1997 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 60/144 (41.67%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ D  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG +F+DE F L      G +SMANAGPNTNGSQFF+  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPDIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGSFEDE-FSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPESMVNQLVDGGWPEPIAKAYADNGGTPWLDQKHTVFGQL 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16
Identity = 53/117 (45.30%), Postives = 65/117 (55.56%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +G I I LY DD P+  ENF ALC  +    Y G  FHR IKDFM+Q             SI+G  F+DE    L H   G VSMAN GP++N SQFFI   K   LD ++ +FG+V
Sbjct:    9 SGDIKIELYVDDAPKACENFLALCASDY---YNGCIFHRNIKDFMVQTGDPTHSGKGGE-SIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKV 121          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.925e-16
Identity = 54/116 (46.55%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I L+ + VP TAENF ALC   +   Y G+ FHR I+ FMIQ             SI+GR F DE    L     G+V+MANAGP+TN SQFFI   K P LD ++ +FG+V
Sbjct:   10 GDIKIELFCESVPRTAENFLALCASGQ---YDGTLFHRNIRGFMIQGGDPTGTGKGGQ-SIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKV 121          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIL3_HUMAN1.333e-1747.41Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL3_NEUCR2.274e-1746.67Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
CYP15_RHIOR2.969e-1747.01Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPIL3_MOUSE5.065e-1746.55Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPI1_STAES6.615e-1741.67Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAEQ6.615e-1741.67Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL2_MOUSE8.640e-1743.97Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPI1_STAHJ8.640e-1741.67Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
CYP10_CAEEL1.128e-1645.30Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]
PPIL3_CRYNE1.925e-1646.55Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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