CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.514e-16
Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + + L+ D  P+T ENF  LC   K   Y G+ FHR I++F+IQ             S +G+ FKDE    LSH G G++SMAN+GPN+N SQFFI      +LD++H +FG+V
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLC---KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGE-SYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRV 400          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAAW (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MW2) GN=MW0836 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAAS (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0824 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAAN (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain N315) GN=SA0815 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAAM (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0954 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAAC (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain COL) GN=SACOL0957 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLTDGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAAB (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0821 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 59/144 (40.97%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGP-GVVSMANAGPNTNGSQFFICTVK----------------------------TPWLDQRHVVFGQV 727
            G +   L+ +  P+T ENF    T  K   Y G TFHRVI DFMIQ             SIYG  F+DE F L+     G +SMAN+GPNTNGSQFFI  +K                            TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLFPNIAPKTVENF---VTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGE-SIYGGAFEDE-FSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQI 163          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIL2_HUMAN2.514e-1643.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPI1_STAAW3.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAS3.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAR3.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAN3.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAM3.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAC3.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAB3.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA83.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA33.283e-1640.97Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
back to top