CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.600e-16
Identity = 58/143 (40.56%), Postives = 67/143 (46.85%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFIC----------------------------TVKTPWLDQRHVVFGQV 727
            G +   L  D  P+T ENF    T  K   Y G TFHRVI DFM+Q             SIYG  F+DE  K +    G +SMANAGP+TNGSQFFI                             T  TPWLDQ+H VFGQ+
Sbjct:   25 GDMTFKLLPDVAPKTVENF---VTHAKNGYYNGVTFHRVINDFMVQGGDPTATGMGGE-SIYGEPFEDEFSKEAFNIYGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQL 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.552e-16
Identity = 57/121 (47.11%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKG-STFHRVIKDFMIQXXXXXXXXXXXXX----SIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I + +Y + VP+TAENF ALC    G GY   S FHRVI  FM Q                 SI+G  F+DE    L H   GV+SMAN GP TNGSQFFI   K P LD  + VFG+V
Sbjct:   10 GDIKVEIYCESVPKTAENFLALC----GSGYYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRV 126          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_MYCTU (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium tuberculosis GN=ppiA PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 52/128 (40.62%), Postives = 67/128 (52.34%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFG------------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I L+G+  P+T  NF  L  G K +             Y G+ FHRVI+ FMIQ                G  F DE + +L    P +++MANAGP TNGSQFFI   KTP L++RH +FG+V
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEV 147          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_MYCBO (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium bovis GN=ppiA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 52/128 (40.62%), Postives = 67/128 (52.34%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFG------------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I L+G+  P+T  NF  L  G K +             Y G+ FHRVI+ FMIQ                G  F DE + +L    P +++MANAGP TNGSQFFI   KTP L++RH +FG+V
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEV 147          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15
Identity = 51/128 (39.84%), Postives = 68/128 (53.12%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFG------------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I + L+G+ VP+T  NF  L  G K +             Y G+ FHRVI+ FMIQ                G  F DE + +L    P +++MANAGP TNGSQFFI   +TP L++RH +FG+V
Sbjct:   24 GDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEV 147          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP7_YEAST (Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccharomyces cerevisiae GN=CPR7 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15
Identity = 60/163 (36.81%), Postives = 75/163 (46.01%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTG--------EKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXS------------------------IYGRTFKDENFKLSHIGPGVVSMANAG-PNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            VY D+SI     K  GRIV  L+ +  P+T ENF  LC G        ++   YKG+ FHRV+K+FMIQ             S                         YG  F+DEN     + P  + MAN G PNTN SQFFI T   P L+ +H +FGQV
Sbjct:    7 VYLDISIDK---KPIGRIVCKLFREKAPKTTENFYKLCAGDVKSPLKDQQYLSYKGNGFHRVVKNFMIQAGDIVFGTQKDSSSSSVGKGGCSIYADKEEVKTDDESFCYG-NFEDENLG-EFVEPFTLGMANLGSPNTNNSQFFITTYAAPHLNGKHSIFGQV 164          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AG I I L+  + P+   NF  LC   +G+ Y G+ FHR++ +F++Q             SIYGR FKDE + +L     G+V+MANAGP+ NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKETPKACRNFVQLCM--EGY-YDGTIFHRMVPEFIVQGGDPTGTGTGGE-SIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 49/116 (42.24%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + I LY +  P+   NF  L   + G+ YKG  FHR I +FMIQ             S++G+ F DE +  ++H G G +SMAN G NTN SQFF     TP LD++H VFG+V
Sbjct:  332 GDLTIELYPEFAPKAVWNFIKL--SQTGY-YKGVAFHRNIPNFMIQGGDPSGSGRGGQ-SVWGKYFDDEFDGPMTHNGRGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKV 443          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14
Identity = 49/116 (42.24%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I + ++ D VP  +ENF ALC       Y  + FHR IK FMIQ             SI+ + FKDE    L H   G++SMAN+GP+TNGSQFFI   K   L++ + VFG++
Sbjct:   10 GDIKVEIFCDSVPLASENFLALCASNY---YNNTIFHRNIKGFMIQGGDPTNTGRGGE-SIWKKQFKDEFPSHLKHNTRGILSMANSGPDTNGSQFFITYGKHRSLNKVYTVFGKI 121          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14
Identity = 47/118 (39.83%), Postives = 62/118 (52.54%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK---LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + + L+GD  P+T  NF  L    K   Y    FHR+I  FM+Q             S +G  F+DE+ +     H   GV+SMAN+GP TNGSQFF     TP LD +H VFG++
Sbjct:  323 GPLNVELHGDRAPKTVYNFVQLAKAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGGE-SYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKL 436          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPI1_STAS15.600e-1640.56Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL3_GIBZE9.552e-1647.11Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
PPIA_MYCTU1.629e-1540.63Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIA_MYCBO1.629e-1540.63Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIA_MYCLE2.779e-1539.84Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
CYP7_YEAST2.779e-1536.81Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccha... [more]
SDC10_DANRE2.353e-1440.17Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]
PPIL2_GIBZE3.073e-1442.24Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]
PPIL3_DICDI8.941e-1442.24Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
PPIL2_CRYNE8.941e-1439.83Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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