CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP4_CAEEL (Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans GN=cyn-4 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.168e-13
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + + L+   VP+  ENF   C+   G+ Y  + FHR+IK+FM+Q             SI+ + F DE     SH   GV+SMAN G NTNGSQFFI      +LD++H +FG++
Sbjct:  289 GPLNLELFAPKVPKACENFITHCSN--GY-YNNTKFHRLIKNFMLQGGDPTGTGHGGE-SIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRL 400          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: TLP20_SPIOL (Peptidyl-prolyl cis-trans isomerase TLP20, chloroplastic (Fragments) OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.525e-13
Identity = 38/49 (77.55%), Postives = 42/49 (85.71%), Query Frame = 2
Query:  296 SAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFR 442
            SAE   LQSKVTNKVYFD+SIGNPVGK    +VIGL+GDDVP+TAENFR
Sbjct:    1 SAEETPLQSKVTNKVYFDISIGNPVGK----VVIGLFGDDVPQTAENFR 45          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13
Identity = 53/142 (37.32%), Postives = 68/142 (47.89%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVK---------------------------TPWLDQRHVVFGQV 727
            G + + L+ D  P+T  NF  L   ++G+ Y G  FHR+I +FMIQ             SIYG +F+DE     +   G +SMANAGPNTNGSQFFI                               TP LD+RH VFGQ+
Sbjct:  297 GDMTLVLFPDHAPKTVANFLGLA--KEGY-YDGIIFHRIIPEFMIQGGDPTGTGMGGQ-SIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQL 434          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AG I I L+  + P+   NF  LC   +G+ Y  + FHRV+ +F+IQ             S++G+ F+DE + +L     G+V+MANAGP+ NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGEIDIELWSKEAPKACRNFVQLCL--EGY-YDNTIFHRVVPEFIIQGGDPTGTGTGGE-SVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13
Identity = 49/116 (42.24%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFK-LSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I L+ D  P    NF  L   ++G+ Y+ + FHR I  FMIQ             SI+G+ FKDE    L H   G++SMAN G NTNGSQFFI       LD +H +FG+V
Sbjct:  285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGDPSGTGRGGQ-SIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRV 396          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13
Identity = 51/116 (43.97%), Postives = 60/116 (51.72%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I + L+ D  P+T  NF  L   + G+ Y    FHR IK FMIQ             SI+ R F DE    L H   GV+SMAN G +TNGSQFFI     P LD  H VFG+V
Sbjct:  295 GNINVELFSDKKPKTCHNFIELA--KTGY-YNDVIFHRNIKKFMIQGGDPTGTGKGGE-SIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKV 406          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_STRCH (Peptidyl-prolyl cis-trans isomerase B OS=Streptomyces chrysomallus GN=cypB PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 48/128 (37.50%), Postives = 63/128 (49.22%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFG------------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I I L  +  P+T  NF  L TG++ +             Y G+ FHRVI  FMIQ                G  F DE + +L    P +++MANAGP TNGSQFF+    T WL  +H +FG+V
Sbjct:   14 GDIEIRLLPNHAPKTVRNFVELATGQREWVNPETGEKSTDRLYDGTVFHRVISGFMIQGGDPLGNGTGGP----GYKFADEFHPELGFTQPYLLAMANAGPGTNGSQFFLTVSPTAWLTGKHTIFGEV 137          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAGP+ NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGTGGE-SIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 43/106 (40.57%), Postives = 55/106 (51.89%), Query Frame = 2
Query:  338 VYFDVSIG-NPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSM 631
            VY D+ I  +P+G    R++  LY D  P T  NF+ LCTG  GF        YK S FHRV+++  IQ             SIYG TF+DENF + H   GV+ M
Sbjct:  146 VYLDICIDLSPIG----RLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12
Identity = 44/117 (37.61%), Postives = 62/117 (52.99%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             S+YG  FKDE + +L     G+V+MANAGP+ NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGTGGE-SVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CYP4_CAEEL1.168e-1339.66Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhab... [more]
TLP20_SPIOL1.525e-1377.55Peptidyl-prolyl cis-trans isomerase TLP20, chlorop... [more]
BPPI_STRP63.397e-1337.32Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
SDC10_XENLA4.437e-1337.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPIL2_SCHPO5.795e-1342.24Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPIL2_RHIOR5.795e-1343.97Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]
PPIB_STRCH7.569e-1337.50Peptidyl-prolyl cis-trans isomerase B OS=Streptomy... [more]
SDC10_MOUSE1.686e-1238.46Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
PPIL6_MOUSE1.686e-1240.57Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
SDC10_RAT2.202e-1237.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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