CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1819 contig Ccv1_Contig1819:5..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12
Identity = 49/121 (40.50%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  368 VGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +   +G I + L+ +  P+   NF  L   +KG+ YK  TFHR IK FMIQ             SI+G+ F DE    L H   G +SMAN G NTN SQFFI     P L+ +H +FG V
Sbjct:  315 ISTTSGDINLELHTEYAPKAVWNFIKLA--KKGY-YKDVTFHRNIKGFMIQGGDPTGTGRGGE-SIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHV 431          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAGP+ NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGTGGE-SIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 49/121 (40.50%), Postives = 62/121 (51.24%), Query Frame = 2
Query:  368 VGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +   +G I + L  +  P+   NF  L   +KG+ YK  TFHR IK FMIQ             SI+G+ F DE    L H   G +SMAN G NTN SQFFI     P L+ +H +FG V
Sbjct:  304 ISTTSGDINLELQTEYAPKAVWNFIKLA--KKGY-YKDVTFHRNIKGFMIQGGDPSGTGRGGE-SIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHV 420          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 48/116 (41.38%), Postives = 61/116 (52.59%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + + L+ +  P+   NF  L   +KG+ YK  TFHR IK FMIQ             SI+G+ F DE    L H   G +SMAN G NTN SQFFI     P L+ +H +FG V
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLA--KKGY-YKDVTFHRNIKGFMIQGGDPTGTGRGGE-SIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHV 433          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAG + NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGSGGE-SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAG + NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGSGGE-SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AG I I L+  + P+   NF  LC       Y  + FHRV+  F++Q             SIYG  FKDE + +L     G+V+MANAG + NGSQFF    +   L+ +H +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCLEAY---YDNTIFHRVVPGFIVQGGDPTGTGSGGE-SIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 45/116 (38.79%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G + + L  +  P+   NF  L   EKG+ Y+   FHR I++FMIQ             SI+G+ F+DE     +H   G+VSMAN G NTN SQFFI       LD++H +F +V
Sbjct:  339 GPLTLELLPEFAPKAVWNFLRL--SEKGY-YRDVAFHRSIRNFMIQGGDPSGTGRGGS-SIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKV 450          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.435e-11
Identity = 45/116 (38.79%), Postives = 58/116 (50.00%), Query Frame = 2
Query:  383 GRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDE-NFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            G I + ++ D  P  AENF   C       Y    +HR IK FMIQ             SI+G+ F DE    L     G+V+ ANAGP+TN SQFFI   K P LD ++ + G+V
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT---YNDVKWHRNIKSFMIQTGDPTGTGKGGQ-SIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKV 121          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIL2_EMENI2.202e-1240.50Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]
SDC10_BOVIN2.876e-1238.46Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
PPIL2_ASPOR2.876e-1240.50Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_ASPFU2.876e-1241.38Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
SDC10_PONAB1.427e-1137.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA1.427e-1137.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN1.427e-1137.61Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
PPIL2_NEUCR1.864e-1138.79Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
PPIL3_USTMA2.435e-1138.79Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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