CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: ERD1_ARATH (ERD1 protein, chloroplastic OS=Arabidopsis thaliana GN=ERD1 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.244e-58 Identity = 111/128 (86.72%), Postives = 124/128 (96.88%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 EARVT LISE++KSG VILFIDEVHTLIGSGTVGRGNKG+GLDI+NLLKPSLGRGELQCIASTT DE R+QFEKDKALARRFQPVLI+EPS+EDAV+ILLGLREKYEAHHNCK+T+EAI+AAV+LS+R Sbjct: 366 EARVTALISEVKKSGKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIASTTLDEFRSQFEKDKALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDAAVYLSSR 493 HSP 2 Score: 144.821 bits (364), Expect = 4.267e-34 Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 2 Query: 386 VQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V SR K DD A ++ E+V ESSLP A+ DDEP +VGPDDIAAVAS+WSGIPVQQITADERMLL+ LE+QL RV+GQDEAVAAISRAVKRSRVGLKDP Sbjct: 552 VLSSRQKQDDGDAISDESGELVEESSLPPAAGDDEPILVGPDDIAAVASVWSGIPVQQITADERMLLMSLEDQLRGRVVGQDEAVAAISRAVKRSRVGLKDP 653
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPE_LACLM (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpE PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 2.652e-39 Identity = 64/128 (50.00%), Postives = 90/128 (70.31%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ L+ EI+K DVI+FIDE+H ++G+G+ G GN +D N+LKP+L RGELQ + +TT +E+R EKD AL RR QPV + EPS ++ + IL G++ +YE +H+ K+T EAI AA HLS R Sbjct: 202 EERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGDGN----MDAGNILKPALARGELQLVGATTLNEYRI-IEKDAALERRMQPVKVDEPSVDETITILRGIQARYEDYHHVKYTDEAIEAAAHLSNR 324 HSP 2 Score: 55.4546 bits (132), Expect = 2.652e-39 Identity = 36/107 (33.64%), Postives = 54/107 (50.47%), Query Frame = 2 Query: 371 APVSKVQGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 A K + ++ + + A D + E +D+D P V+ DI + + IPV + E+ L+ L + L VIGQDEAV IS+A++RSRVGL P Sbjct: 365 AESKKNEATKAEDFEKAAHFRDQISKLRELQKQEVTDEDMP-VITEKDIEQIVEQKTQIPVGDLKEKEQTQLINLADDLKAHVIGQDEAVDKISKAIRRSRVGLGKP 470
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPA_RHOBL (ClpA homolog protein OS=Rhodopseudomonas blastica PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.688e-38 Identity = 61/128 (47.66%), Postives = 90/128 (70.31%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E++ D ILFIDE+HT+IG+G G +D SNLLKP+L G+L+C+ STT E R FEKD+AL+RRFQ + ++EPS DA++IL+GL+ +E HH ++T +AI +AV L++R Sbjct: 294 EERLKAVVKELEDHPDAILFIDEIHTVIGAGATSGG----AMDASNLLKPALQGGKLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDAIKILMGLKPHFEEHHELRYTADAIKSAVELASR 417 HSP 2 Score: 52.373 bits (124), Expect = 1.688e-38 Identity = 30/93 (32.26%), Postives = 49/93 (52.69%), Query Frame = 2 Query: 413 DVVASMGDTSEIVVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 DV+ G +V SD V+G +I AV + + IP + ++ D+ L LE L + V GQD+A+ A+S ++K +R GL++P Sbjct: 430 DVIDEAGAAQHLV--------SDSKRKKVLGTKEIEAVVAKIARIPPRNVSKDDAETLRDLERTLKRLVFGQDKAIEALSASIKLARAGLREP 514
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_STAAW (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MW2) GN=clpC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 74/128 (57.81%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EIQ++G+VILFIDE+HTL+G+G G +G +D SN+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EPS D V IL GLR++YEAHH + EAI AAV LS R Sbjct: 258 EERLKKVMEEIQQAGNVILFIDELHTLVGAG----GAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_STAAS (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MSSA476) GN=clpC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 74/128 (57.81%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EIQ++G+VILFIDE+HTL+G+G G +G +D SN+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EPS D V IL GLR++YEAHH + EAI AAV LS R Sbjct: 258 EERLKKVMEEIQQAGNVILFIDELHTLVGAG----GAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_STAAR (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain MRSA252) GN=clpC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 74/128 (57.81%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EIQ++G+VILFIDE+HTL+G+G G +G +D SN+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EPS D V IL GLR++YEAHH + EAI AAV LS R Sbjct: 258 EERLKKVMEEIQQAGNVILFIDELHTLVGAG----GAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_STAAN (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain N315) GN=clpC PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 74/128 (57.81%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EIQ++G+VILFIDE+HTL+G+G G +G +D SN+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EPS D V IL GLR++YEAHH + EAI AAV LS R Sbjct: 258 EERLKKVMEEIQQAGNVILFIDELHTLVGAG----GAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_STAAM (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpC PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 74/128 (57.81%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EIQ++G+VILFIDE+HTL+G+G G +G +D SN+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EPS D V IL GLR++YEAHH + EAI AAV LS R Sbjct: 258 EERLKKVMEEIQQAGNVILFIDELHTLVGAG----GAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_STAAC (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain COL) GN=clpC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 74/128 (57.81%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EIQ++G+VILFIDE+HTL+G+G G +G +D SN+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EPS D V IL GLR++YEAHH + EAI AAV LS R Sbjct: 258 EERLKKVMEEIQQAGNVILFIDELHTLVGAG----GAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_STAAB (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 74/128 (57.81%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EIQ++G+VILFIDE+HTL+G+G G +G +D SN+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EPS D V IL GLR++YEAHH + EAI AAV LS R Sbjct: 258 EERLKKVMEEIQQAGNVILFIDELHTLVGAG----GAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNR 380 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |