CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 64/130 (49.23%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++S++ K+ G +ILFIDE+HT++G+G K G +D N+LKP+L RGEL CI +TT DE+R EKD AL RRFQ V + EP+ ED + IL GL+E+Y HH + T AI AA LS R Sbjct: 256 EERLKAVLSDLSKNEGQIILFIDELHTMVGAG------KADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_STRCO (Chaperone protein clpB OS=Streptomyces coelicolor GN=clpB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 62/129 (48.06%), Postives = 89/129 (68.99%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ T+++EI+ S G V+ FIDE+HT++G+G G + +D N+LKP L RGEL+ + +TT DE+R + EKD AL RRFQ VL++EP+ ED++ IL GL+ +YEAHH + A+ AA LS R Sbjct: 257 EERLKTVLAEIKDSDGQVVTFIDELHTVVGAGAGG----DSAMDAGNMLKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDSIAILRGLKGRYEAHHKVQIADSALVAAASLSDR 381 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 2 Query: 452 VESSLPSASDDDEPAV--------VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 +E L +AS+ +E VG DDIA V + W+GIP ++ E L+ +E++L KR+IGQ +AV A+S AV+RSR G+ DP Sbjct: 511 LERDLEAASEAEEEVARDTMVKEEVGADDIADVVASWTGIPAGRLLEGETQKLLRMEDELGKRLIGQTQAVRAVSDAVRRSRAGIADP 598
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ +I+ S G +I FIDE+HT++G+G G G +D N++KP L RGEL+ + +TT DE+R EKD AL RRFQ V + EPS ED V IL GL+++YE HH + T A+ AA LS R Sbjct: 256 EERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEG----AMDAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKDRYEVHHGVRITDSALVAAATLSDR 380 HSP 2 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 452 VESSLPSASDDDEPAV---VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 +E++LP A + + VGPDDIA V S W+GIP ++ E L+ +E++L KRV+GQ AV A+S AV+R+R G+ DP Sbjct: 514 LEAALPQAEARENVMLKEEVGPDDIAEVVSAWTGIPAGRMLEGETAKLLRMEDELGKRVVGQKRAVQAVSDAVRRARAGVADP 596
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIN (Chaperone protein clpB OS=Leptospira interrogans GN=clpB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 65/129 (50.39%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ L+ E++ S G+VILFIDE+HTL+G+G LD SN+LKP L RGEL+CI +TT E++ EKD AL RRFQPV + EPS E+ V IL GL+ +YE HH + A+ AA LS R Sbjct: 258 EDRLKALLDEVKSSDGEVILFIDEIHTLVGAGATEGA-----LDASNMLKPMLARGELRCIGATTLKEYQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKGRYELHHGIRILDSALIAAATLSNR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_LEPIC (Chaperone protein clpB OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=clpB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 65/129 (50.39%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ L+ E++ S G+VILFIDE+HTL+G+G LD SN+LKP L RGEL+CI +TT E++ EKD AL RRFQPV + EPS E+ V IL GL+ +YE HH + A+ AA LS R Sbjct: 258 EDRLKALLDEVKSSDGEVILFIDEIHTLVGAGATEGA-----LDASNMLKPMLARGELRCIGATTLKEYQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKGRYELHHGIRILDSALIAAATLSNR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 61/129 (47.29%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++E+ KS G ++LFIDE+HT++G+G +D NLLKP L RGEL+CI +TT DE+R EKD AL RRFQ V + +P+ ED + IL GL+E+YE HH + + A+ AA LS R Sbjct: 259 EERLKAVLNEVTKSEGQIVLFIDEIHTVVGAGATQGA-----MDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTISILRGLKERYEVHHGVRISDSALVAAAVLSHR 382 HSP 2 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V +DIA + S W+GIPV ++ A ER L+ LE++L KRV+GQ+EAV +S A++RSR GL DP Sbjct: 538 VTEEDIAEIISKWTGIPVSKLVASEREKLLHLEDELHKRVVGQEEAVRIVSEAIQRSRAGLADP 601
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_CLOAB (Chaperone protein clpB OS=Clostridium acetobutylicum GN=clpB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSG-TVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+++S G +ILFIDE+HT++G+G T G +D N++KP L RGEL CI +TT DE+R EKDKAL RRFQ V I EP+ +DA+ IL GL+E++E HH + AI AA LS R Sbjct: 260 EERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEG------AMDAGNIIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQKVQIDEPTVDDAISILRGLKERFEIHHGVRIHDNAIVAAAKLSDR 383
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: HSP98_NEUCR (Heat shock protein hsp98 OS=Neurospora crassa GN=hsp98 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 63/129 (48.84%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGD-VILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EI +S + +ILFIDE+H L+G+G G G G+D +NLLKP L RG+L CI +TT E+R EKD A RRFQ V++ EPS + + IL GL+EKYE HH + AI AA +L+AR Sbjct: 274 EERMKGVLKEISESKEMIILFIDEIHLLMGAGASGEG----GMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVIVKEPSVSETISILRGLKEKYEVHHGVTISDAAIVAAANLAAR 398
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ +I+ S G +I FIDE+HT++G+G G G +D N++KP L RGEL+ + +TT DE+R EKD AL RRFQ V + EPS ED + IL GL+++YE HH + T A+ AA LS R Sbjct: 256 EERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEG----AMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDR 380 HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 452 VESSLPSASDDDEPAV---VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 ++++LP A ++ + VGPDDIA V S W+GIP ++ E L+ +E++L KRVIGQ AV A+S AV+RSR G+ DP Sbjct: 514 LDAALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDP 596
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ +I+ S G +I FIDE+HT++G+G G G +D N++KP L RGEL+ + +TT DE+R EKD AL RRFQ V + EPS ED + IL GL+++YE HH + T A+ AA LS R Sbjct: 256 EERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEG----AMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDR 380 HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 452 VESSLPSASDDDEPAV---VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 ++++LP A ++ + VGPDDIA V S W+GIP ++ E L+ +E++L KRVIGQ AV A+S AV+RSR G+ DP Sbjct: 514 LDAALPQAQAREQVMLKEEVGPDDIADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDP 596 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |