CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ S G +ILFIDE+HT++G+G V +G+ +D NLLKP L RGEL+CI +TT DE+R EKD AL RRFQ V + +P+ ED + IL GL+E+YE HH + + A+ AA LS R Sbjct: 258 EERLKAVLKEVTDSEGIIILFIDEIHTVVGAGAV----QGS-MDAGNLLKPMLARGELRCIGATTLDEYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRISDNALVAAAVLSTR 381 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 512 DIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 DIA + S W+GIPV ++ E L+ L+E+L +RVIGQ+EAV+A++ A++RSR GL DP Sbjct: 541 DIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGLSDP 600
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPA_ECOLI (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli (strain K12) GN=clpA PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 59/128 (46.09%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R L+ ++++ + ILFIDE+HT+IG+G G +D +NL+KP L G+++ I STT E FEKD+ALARRFQ + I+EPS E+ V+I+ GL+ KYEAHH+ ++T +A+ AAV L+ + Sbjct: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ----VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPA_ECOL6 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O6 GN=clpA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 59/128 (46.09%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R L+ ++++ + ILFIDE+HT+IG+G G +D +NL+KP L G+++ I STT E FEKD+ALARRFQ + I+EPS E+ V+I+ GL+ KYEAHH+ ++T +A+ AAV L+ + Sbjct: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ----VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPA_ECO57 (ATP-dependent Clp protease ATP-binding subunit clpA OS=Escherichia coli O157:H7 GN=clpA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 59/128 (46.09%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R L+ ++++ + ILFIDE+HT+IG+G G +D +NL+KP L G+++ I STT E FEKD+ALARRFQ + I+EPS E+ V+I+ GL+ KYEAHH+ ++T +A+ AAV L+ + Sbjct: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ----VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_LACPL (Chaperone protein clpB OS=Lactobacillus plantarum GN=clpB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EI+KS G +I+FIDE+H ++G+G +G+ +D NLLKP L RGEL I +TT DE+R EKDKAL RRFQ VL++EPS ED + IL GL+E++E HH + A+ AA LS R Sbjct: 258 EERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKT----EGS-MDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTISILRGLKERFEIHHGVRIHDNALVAAAKLSDR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 67/129 (51.94%), Postives = 83/129 (64.34%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +I E+ KS G VILFIDE+HTL+G+G +D SN+LKP+L RGEL CI +TT +E+R EKD AL RRFQ V EPS ED + IL GL+EKYE +H + AI AA LS R Sbjct: 258 EERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGA-----MDASNMLKPALARGELHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKYENYHGIRIKDSAIIAAATLSDR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_DEIRA (Chaperone protein clpB OS=Deinococcus radiodurans GN=clpB PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.920e-26 Identity = 64/129 (49.61%), Postives = 89/129 (68.99%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +I E+ KS G++ILF+DE+HT++G+G +G+ D N+LKP+L RGEL I +TT DE+R + EKD AL RRFQPV + EPS ED + IL G++E+Y+ HHN + T A+ AA LS R Sbjct: 248 EERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKT----EGSP-DAGNMLKPALARGELHLIGATTLDEYR-EIEKDAALERRFQPVFVDEPSVEDTISILRGIKERYQVHHNVEITDPALVAAATLSNR 370 HSP 2 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 389 QGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 + +RL+Y ++ A D ++ E L SA + V +DIAAV S W+GIPV ++ ER L+ LEEQL RVIGQD A+ ++S A++R+R GL DP Sbjct: 488 EAARLEYGELPALEKDVQDL--EKKLKSA--EFAHMEVTEEDIAAVVSRWTGIPVSKLMEGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAGLNDP 584
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 3 EARVTTLISE-IQKSGDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +I E +Q +G +ILFIDE+HT++G+G K G +D N+LKP+L RGEL I +TT DE+R + EKD AL RRFQPV + EPS E+ V IL G++EKYE HH + + A+ AA LS R Sbjct: 248 EERLKAVIQETVQSAGQIILFIDEIHTVVGAG------KAEGAVDAGNMLKPALARGELHLIGATTLDEYR-EIEKDPALERRFQPVFVDEPSLEETVSILRGIKEKYEVHHGVRISDPALIAAAQLSHR 370 HSP 2 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 34/65 (52.31%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 497 VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 +V +DIAA+ S W+GIPV ++ ER L+ LE++L KRV+GQDEA+ A++ A++R+R GLKDP Sbjct: 520 MVTEEDIAAIVSRWTGIPVAKLMEGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAGLKDP 584
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 61/129 (47.29%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EI+ + G++I FIDE+HT++G+G G + +D N++KP L RGEL+ + +TT DE+R EKD AL RRFQ V + EPS EDAV IL GL+E+YE HH + A+ AA LS R Sbjct: 257 EERLKAVLDEIKSAEGEIITFIDELHTIVGAGATG----DSAMDAGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDAVGILRGLKERYEVHHGVRIQDSALVAAATLSDR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFT (Chaperone protein clpB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.275e-26 Identity = 65/130 (50.00%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++++ K+ G VILFIDE+HT++G+G K G +D N+LKP+L RGEL CI +TT DE+R EKD AL RRFQ V + EP+ ED + IL GL+EKY HH + T AI AA LS R Sbjct: 256 EERLKGVLNDLAKNEGRVILFIDELHTMVGAG------KAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNR 379 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |